RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 ALLCQ8N6M5 410 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 SUMF1Q8NBK3 374 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 TXNDC5Q8NBS9 432 aaKnown RBP10.89□□□□□ -0.67
MCF2L-216ENST00000439475 DQX1Q8TE96 717 aaKnown RBP10.89□□□□□ -0.67
MCF2L-216ENST00000439475 RNF34Q969K3 372 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 HHIPQ96QV1 700 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 CPXM1Q96SM3 734 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 GANQ9H2C0 597 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 TJP2Q9UDY2 1190 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 EBF1Q9UH73 591 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 CYTH4Q9UIA0 394 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 STAP1Q9ULZ2 295 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 SIK3Q9Y2K2 1263 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 CACNA1HO95180 2353 aa10.89□□□□□ -0.67
MCF2L-216ENST00000439475 SYCE3A1L190 88 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 GOLGA6L19H0YKK7 550 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 GFRA2O00451 464 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 HRO43593 1189 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 TSPAN3O60637 253 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 RPP40O75818 363 aaKnown RBP10.88□□□□□ -0.67
MCF2L-216ENST00000439475 SERPINC1P01008 464 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 IGLV3-27P01718 113 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 ABCB4P21439 1286 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 KLK7P49862 253 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 DMWDQ09019 674 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 EIF4HQ15056 248 aaKnown RBP10.88□□□□□ -0.67
MCF2L-216ENST00000439475 PTPN20Q4JDL3 420 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 MPP7Q5T2T1 576 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 SYPL2Q5VXT5 272 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 LAIR1Q6GTX8 287 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 TRIM72Q6ZMU5 477 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 FAM183BPQ6ZVS7 135 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 SND1Q7KZF4 910 aaKnown RBP eCLIP10.88□□□□□ -0.67
MCF2L-216ENST00000439475 ANKS1BQ7Z6G8 1248 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 IL17RCQ8NAC3 791 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 ZNF397Q8NF99 534 aaPredicted RBP10.88□□□□□ -0.67
MCF2L-216ENST00000439475 WFIKKN2Q8TEU8 576 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 GAB3Q8WWW8 586 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 SLC39A13Q96H72 371 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 FAM204AQ9H8W3 233 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 C2orf42Q9NWW7 574 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 SMG5Q9UPR3 1016 aaKnown RBP10.88□□□□□ -0.67
MCF2L-216ENST00000439475 PAXBP1Q9Y5B6 917 aa10.88□□□□□ -0.67
MCF2L-216ENST00000439475 SGK1O00141 431 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 TRIM24O15164 1050 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 TBL1XO60907 577 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 RHOBTB1O94844 696 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 F9P00740 461 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 ERBB2P04626 1255 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 MMEP08473 750 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 HOXB2P14652 356 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 HNRNPLP14866 589 aaKnown RBP eCLIP10.87□□□□□ -0.67
MCF2L-216ENST00000439475 CCR1P32246 355 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 SCNN1AP37088 669 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 GABRB2P47870 512 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 PXNP49023 591 aaPredicted RBP10.87□□□□□ -0.67
MCF2L-216ENST00000439475 CDR2Q01850 454 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 PIK3R6Q5UE93 754 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 SLC26A9Q7LBE3 791 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.87□□□□□ -0.67
MCF2L-216ENST00000439475 NOP9Q86U38 636 aaKnown RBP10.87□□□□□ -0.67
MCF2L-216ENST00000439475 TAC4Q86UU9 113 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 DHX40Q8IX18 779 aaKnown RBP10.87□□□□□ -0.67
MCF2L-216ENST00000439475 ADAM32Q8TC27 787 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 EPS8L1Q8TE68 723 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 DDX1Q92499 740 aaKnown RBP10.87□□□□□ -0.67
MCF2L-216ENST00000439475 LOXL4Q96JB6 756 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 BTN2A3PQ96KV6 586 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 FCRL2Q96LA5 508 aaPredicted RBP10.87□□□□□ -0.67
MCF2L-216ENST00000439475 SLC2A13Q96QE2 648 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 PPP1R9BQ96SB3 815 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 RTN4Q9NQC3 1192 aaKnown RBP10.87□□□□□ -0.67
MCF2L-216ENST00000439475 DDIT4Q9NX09 232 aa10.87□□□□□ -0.67
MCF2L-216ENST00000439475 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.87□□□□□ -0.67
MCF2L-216ENST00000439475 BCCIPQ9P287 314 aaKnown RBP eCLIP10.87□□□□□ -0.67
MCF2L-216ENST00000439475 SYNJ2BP-COX16A0A087WUM0 186 aa10.86□□□□□ -0.67
MCF2L-216ENST00000439475 PRRT4C9JH25 899 aa10.86□□□□□ -0.67
MCF2L-216ENST00000439475 F5H5T6 163 aa10.86□□□□□ -0.67
MCF2L-216ENST00000439475 M0QYT0 321 aa10.86□□□□□ -0.67
MCF2L-216ENST00000439475 FOXD2O60548 495 aaPredicted RBP10.86□□□□□ -0.67
MCF2L-216ENST00000439475 DAB1O75553 588 aa10.86□□□□□ -0.67
MCF2L-216ENST00000439475 GRAP2O75791 330 aa10.86□□□□□ -0.67
MCF2L-216ENST00000439475 MOCS3O95396 460 aa10.86□□□□□ -0.67
MCF2L-216ENST00000439475 MOCS2O96007 188 aaPredicted RBP10.86□□□□□ -0.67
MCF2L-216ENST00000439475 ATP5BP06576 529 aaKnown RBP10.86□□□□□ -0.67
MCF2L-216ENST00000439475 RETP07949 1114 aa10.86□□□□□ -0.67
MCF2L-216ENST00000439475 ATP1A3P13637 1013 aa10.86□□□□□ -0.67
MCF2L-216ENST00000439475 FERP16591 822 aa10.86□□□□□ -0.67
MCF2L-216ENST00000439475 MATKP42679 507 aa10.86□□□□□ -0.67
MCF2L-216ENST00000439475 JAM2P57087 298 aa10.86□□□□□ -0.67
MCF2L-216ENST00000439475 RNASE9P60153 205 aaKnown RBP10.86□□□□□ -0.67
MCF2L-216ENST00000439475 MESP2Q0VG99 397 aa10.86□□□□□ -0.67
MCF2L-216ENST00000439475 STARD3Q14849 445 aa10.86□□□□□ -0.67
MCF2L-216ENST00000439475 TAF5Q15542 800 aa10.86□□□□□ -0.67
MCF2L-216ENST00000439475 ELF2Q15723 593 aa10.86□□□□□ -0.67
MCF2L-216ENST00000439475 GEN1Q17RS7 908 aa10.86□□□□□ -0.67
MCF2L-216ENST00000439475 ZC3H12AQ5D1E8 599 aaKnown RBP10.86□□□□□ -0.67
MCF2L-216ENST00000439475 MS4A13Q5J8X5 152 aa10.86□□□□□ -0.67
MCF2L-216ENST00000439475 FAM102AQ5T9C2 384 aaPredicted RBP10.86□□□□□ -0.67
MCF2L-216ENST00000439475 NAA35Q5VZE5 725 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms