RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 PARP4Q9UKK3 1724 aaKnown RBP3.55□□□□□ -1.84
HMGB1P18-201ENST00000438801 PLEKHH2Q8IVE3 1493 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 CNTNAP2Q9UHC6 1331 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 SETD2Q9BYW2 2564 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 A0A1W2PPL8 197 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 FAM90A10PA6NDY2 464 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 H3BML4 177 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 M0R3H8 397 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 TBC1D4O60343 1298 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 UBXN7O94888 489 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 ABLIM3O94929 683 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 CT47B1P0C2W7 299 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 KITP10721 976 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 PRKAR1BP31321 381 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 DIO1P49895 249 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 BCAT1P54687 386 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 SLC13A2Q13183 592 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 RAB32Q13637 225 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 LARS2Q15031 903 aaKnown RBP3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 AWAT1Q58HT5 328 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 DENND2CQ68D51 928 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 FAM109BQ6ICB4 259 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 TMEM65Q6PI78 240 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 CTHRC1Q96CG8 243 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 ZMAT3Q9HA38 289 aaKnown RBP3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 TMEM184CQ9NVA4 438 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 GABBR1Q9UBS5 961 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 USP22Q9UPT9 525 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 CLTCL1P53675 1640 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 CCDC18Q5T9S5 1454 aa3.54□□□□□ -1.84
HMGB1P18-201ENST00000438801 CD8B2A6NJW9 211 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 TMEM233B4DJY2 109 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 OAZ2O95190 189 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 CYP19A1P11511 503 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 APEHP13798 732 aaKnown RBP3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 EPHA3P29320 983 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 ID2Q02363 134 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 MIDNQ504T8 468 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 TMEM63BQ5T3F8 832 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 TMTC4Q5T4D3 741 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 DCAF12L1Q5VU92 463 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 DEF8Q6ZN54 512 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 PIP4P1Q86T03 277 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 LIX1LQ8IVB5 337 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 CNTROBQ8N137 903 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 LINC01465Q8N7H1 131 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 ZCRB1Q8TBF4 217 aaKnown RBP3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 DNAJB14Q8TBM8 379 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 ADAMTS15Q8TE58 950 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 RUNDC1Q96C34 613 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 VN1R3Q9BXE9 311 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 TRIM5Q9C035 493 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 SMURF2Q9HAU4 748 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 DDX21Q9NR30 783 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 SNX15Q9NRS6 342 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 POT1Q9NUX5 634 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 LRP12Q9Y561 859 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 CDY1Q9Y6F8 540 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 ATP7BP35670 1465 aa3.53□□□□□ -1.84
HMGB1P18-201ENST00000438801 CARMIL1Q5VZK9 1371 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 RP1L1Q8IWN7 2480 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 ZMYM2Q9UBW7 1377 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 CCDC187A0A096LP49 1063 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 A0A0G2JLW4 131 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 TLR2O60603 784 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 SRGAP2O75044 1071 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 CREB1P16220 341 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 MTHFSP49914 203 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 TIRAPP58753 221 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 MRPS5P82675 430 aaKnown RBP3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 SRSF1Q07955 248 aaKnown RBP eCLIP3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 SEC23BQ15437 767 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 LEXMQ3ZCV2 418 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 ANO7Q6IWH7 933 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 RANBP10Q6VN20 620 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 DCDC5Q6ZRR9 648 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 USP38Q8NB14 1042 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 PPP1R35Q8TAP8 253 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 MARK4Q96L34 752 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 HS6ST2Q96MM7 605 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 PPP1R9BQ96SB3 815 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 XPNPEP3Q9NQH7 507 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 RNF186Q9NXI6 227 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 THEGQ9P2T0 379 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 MGAT4CQ9UBM8 478 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 HEY2Q9UBP5 337 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 PNMA8BQ9ULN7 279 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 PAXBP1Q9Y5B6 917 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 SPTA1P02549 2419 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 KIAA1107Q9UPP5 1409 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 CCDC88AQ3V6T2 1871 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 TRPM7Q96QT4 1865 aa3.52□□□□□ -1.85
HMGB1P18-201ENST00000438801 UBR5O95071 2799 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 FBN2P35556 2912 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 PHGDHO43175 533 aaKnown RBP3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 SPRY2O43597 315 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 RGS10O43665 173 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 TMPRSS11DO60235 418 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 RASAL1O95294 804 aa3.51□□□□□ -1.85
HMGB1P18-201ENST00000438801 ALPLP05186 524 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms