RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 HOXC13P31276 330 aa25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 SOX5P35711 763 aa25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 CDK17Q00537 523 aa25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 E2F5Q15329 346 aa25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 DCAF6Q58WW2 860 aa25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 SDE2Q6IQ49 451 aa25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 FAM183BPQ6ZVS7 135 aa25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 APTXQ7Z2E3 356 aaKnown RBP25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 NOP9Q86U38 636 aaKnown RBP25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 DHX40Q8IX18 779 aaKnown RBP25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 ADAM32Q8TC27 787 aa25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 GAB3Q8WWW8 586 aa25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 DDX1Q92499 740 aaKnown RBP25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 SLC39A13Q96H72 371 aa25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 PIWIL1Q96J94 861 aaKnown RBP25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 FCRL2Q96LA5 508 aaPredicted RBP25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 GMEB2Q9UKD1 530 aa25.72■■□□□ 1.71
RAPGEF1-206ENST00000438647 RPP40O75818 363 aaKnown RBP25.71■■□□□ 1.71
RAPGEF1-206ENST00000438647 GFPT2O94808 682 aa25.71■■□□□ 1.71
RAPGEF1-206ENST00000438647 TRUB2O95900 331 aaKnown RBP25.71■■□□□ 1.71
RAPGEF1-206ENST00000438647 APOEP02649 317 aa25.71■■□□□ 1.71
RAPGEF1-206ENST00000438647 ERBB2P04626 1255 aa25.71■■□□□ 1.71
RAPGEF1-206ENST00000438647 NTSR1P30989 418 aa25.71■■□□□ 1.71
RAPGEF1-206ENST00000438647 STAT1P42224 750 aa25.71■■□□□ 1.71
RAPGEF1-206ENST00000438647 JAM2P57087 298 aa25.71■■□□□ 1.71
RAPGEF1-206ENST00000438647 SLC6A3Q01959 620 aa25.71■■□□□ 1.71
RAPGEF1-206ENST00000438647 TAF5Q15542 800 aa25.71■■□□□ 1.71
RAPGEF1-206ENST00000438647 LAIR1Q6GTX8 287 aa25.71■■□□□ 1.71
RAPGEF1-206ENST00000438647 OLFML1Q6UWY5 402 aa25.71■■□□□ 1.71
RAPGEF1-206ENST00000438647 SLC26A9Q7LBE3 791 aa25.71■■□□□ 1.71
RAPGEF1-206ENST00000438647 ANKS1BQ7Z6G8 1248 aa25.71■■□□□ 1.71
RAPGEF1-206ENST00000438647 P2RY11Q96G91 374 aa25.71■■□□□ 1.71
RAPGEF1-206ENST00000438647 SLC2A13Q96QE2 648 aa25.71■■□□□ 1.71
RAPGEF1-206ENST00000438647 OTOGLQ3ZCN5 2332 aa25.71■■□□□ 1.71
RAPGEF1-206ENST00000438647 EP300Q09472 2414 aaPredicted RBP25.71■■□□□ 1.71
RAPGEF1-206ENST00000438647 GPR179Q6PRD1 2367 aa25.7■■□□□ 1.71
RAPGEF1-206ENST00000438647 SYCE3A1L190 88 aa25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 TYW5A2RUC4 315 aaKnown RBP25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 PRRT4C9JH25 899 aa25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 GFRA2O00451 464 aa25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 EPHB6O15197 1021 aa25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 TSPAN3O60637 253 aa25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 ADAM23O75077 832 aa25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 HOXD9P28356 352 aaPredicted RBP25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 GBP1P32455 592 aa25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 SRSF5Q13243 272 aaKnown RBP25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 FILIP1LQ4L180 1135 aa25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 MPP7Q5T2T1 576 aa25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 ANO7Q6IWH7 933 aa25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 TMEM92Q6UXU6 159 aa25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 RASSF3Q86WH2 238 aa25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 ERICH1Q86X53 443 aa25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 CHPFQ8IZ52 775 aa25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 DEFB106AQ8N104 65 aa25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 ZNF557Q8N988 423 aaPredicted RBP25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 ZNF397Q8NF99 534 aaPredicted RBP25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 UCMAQ8WVF2 138 aa25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 FUCA2Q9BTY2 467 aa25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 FAM204AQ9H8W3 233 aa25.7■■□□□ 1.7
RAPGEF1-206ENST00000438647 FRYLO94915 3013 aa25.69■■□□□ 1.7
RAPGEF1-206ENST00000438647 MYO18AQ92614 2054 aaKnown RBP25.69■■□□□ 1.7
RAPGEF1-206ENST00000438647 NPC1O15118 1278 aa25.69■■□□□ 1.7
RAPGEF1-206ENST00000438647 IGLV3-25P01717 112 aa25.69■■□□□ 1.7
RAPGEF1-206ENST00000438647 SLC2A3P11169 496 aa25.69■■□□□ 1.7
RAPGEF1-206ENST00000438647 EIF4HQ15056 248 aaKnown RBP25.69■■□□□ 1.7
RAPGEF1-206ENST00000438647 FAM133BQ5BKY9 247 aaKnown RBP25.69■■□□□ 1.7
RAPGEF1-206ENST00000438647 EGFLAMQ63HQ2 1017 aa25.69■■□□□ 1.7
RAPGEF1-206ENST00000438647 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.69■■□□□ 1.7
RAPGEF1-206ENST00000438647 C18orf8Q96DM3 657 aa25.69■■□□□ 1.7
RAPGEF1-206ENST00000438647 ZDHHC4Q9NPG8 344 aa25.69■■□□□ 1.7
RAPGEF1-206ENST00000438647 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.69■■□□□ 1.7
RAPGEF1-206ENST00000438647 SLC12A6Q9UHW9 1150 aa25.69■■□□□ 1.7
RAPGEF1-206ENST00000438647 CFAP54Q96N23 3096 aa25.68■■□□□ 1.7
RAPGEF1-206ENST00000438647 DAB1O75553 588 aa25.68■■□□□ 1.7
RAPGEF1-206ENST00000438647 MMEP08473 750 aa25.68■■□□□ 1.7
RAPGEF1-206ENST00000438647 HOXB2P14652 356 aa25.68■■□□□ 1.7
RAPGEF1-206ENST00000438647 HNRNPLP14866 589 aaKnown RBP eCLIP25.68■■□□□ 1.75e-9■■■□□ 17.5
RAPGEF1-206ENST00000438647 SCNN1AP37088 669 aa25.68■■□□□ 1.7
RAPGEF1-206ENST00000438647 GABRB2P47870 512 aa25.68■■□□□ 1.7
RAPGEF1-206ENST00000438647 CDR2Q01850 454 aa25.68■■□□□ 1.7
RAPGEF1-206ENST00000438647 LPAL2Q16609 132 aa25.68■■□□□ 1.7
RAPGEF1-206ENST00000438647 GEN1Q17RS7 908 aa25.68■■□□□ 1.7
RAPGEF1-206ENST00000438647 USP39Q53GS9 565 aaKnown RBP25.68■■□□□ 1.7
RAPGEF1-206ENST00000438647 PIK3R6Q5UE93 754 aa25.68■■□□□ 1.7
RAPGEF1-206ENST00000438647 CACNA2D4Q7Z3S7 1137 aa25.68■■□□□ 1.7
RAPGEF1-206ENST00000438647 BTN2A3PQ96KV6 586 aa25.68■■□□□ 1.7
RAPGEF1-206ENST00000438647 DDIT4Q9NX09 232 aa25.68■■□□□ 1.7
RAPGEF1-206ENST00000438647 RRN3Q9NYV6 651 aa25.68■■□□□ 1.7
RAPGEF1-206ENST00000438647 NOCTQ9UK39 431 aaKnown RBP25.68■■□□□ 1.7
RAPGEF1-206ENST00000438647 GVINP1Q7Z2Y8 2422 aa25.67■■□□□ 1.7
RAPGEF1-206ENST00000438647 WDR87Q6ZQQ6 2873 aa25.67■■□□□ 1.7
RAPGEF1-206ENST00000438647 ZBTB24O43167 697 aaPredicted RBP25.67■■□□□ 1.7
RAPGEF1-206ENST00000438647 GRAP2O75791 330 aa25.67■■□□□ 1.7
RAPGEF1-206ENST00000438647 MOCS2O96007 188 aaPredicted RBP25.67■■□□□ 1.7
RAPGEF1-206ENST00000438647 NOS2P35228 1153 aa25.67■■□□□ 1.7
RAPGEF1-206ENST00000438647 TPM4P67936 248 aa25.67■■□□□ 1.7
RAPGEF1-206ENST00000438647 MTA1Q13330 715 aa25.67■■□□□ 1.7
RAPGEF1-206ENST00000438647 ZC3H12AQ5D1E8 599 aaKnown RBP25.67■■□□□ 1.7
RAPGEF1-206ENST00000438647 RFWD3Q6PCD5 774 aa25.67■■□□□ 1.7
RAPGEF1-206ENST00000438647 C11orf74Q86VG3 221 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms