RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 MPHOSPH9Q99550 1183 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 CITED2Q99967 270 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 FUT8Q9BYC5 575 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 ANKRD2Q9GZV1 360 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 MMADHCQ9H3L0 296 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 TMEM8AQ9HCN3 771 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 MID1IP1Q9NPA3 183 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 SNX15Q9NRS6 342 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 SNTG1Q9NSN8 517 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 TCP11L1Q9NUJ3 509 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 COL20A1Q9P218 1284 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 CBLCQ9ULV8 474 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 JRKLQ9Y4A0 524 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 CCL27Q9Y4X3 112 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 FAM169AQ9Y6X4 670 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 IL16Q14005 1332 aa3.87□□□□□ -1.79
HMGB1P12-201ENST00000438594 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 ARPC4-TTLL3A0A0A6YYG9 625 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 CLRN2A0PK11 232 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 CCDC151A5D8V7 595 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 ZSCAN5CA6NGD5 496 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 PSMA7O14818 248 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 IKBKBO14920 756 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 CTAGE5O15320 804 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 ASNA1O43681 348 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 MTRF1O75570 445 aaKnown RBP3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 TRIM16O95361 564 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 ADCY5O95622 1261 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 NDST3O95803 873 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 CLEC2LP0C7M8 214 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 MYL4P12829 197 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 NPR1P16066 1061 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 KELP23276 732 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 PTX3P26022 381 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 GP5P40197 560 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 MANFP55145 182 aaKnown RBP3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 ACTR2P61160 394 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 MRPS9P82933 396 aaKnown RBP3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 LACTBP83111 547 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 HGFACQ04756 655 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 YWHAHQ04917 246 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 CBX3Q13185 183 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 IL10RAQ13651 578 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 ZNF174Q15697 407 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 GPR19Q15760 415 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 BAK1Q16611 211 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 UGT8Q16880 541 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 SUPT20HL1Q3ZLR7 823 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 AMOTQ4VCS5 1084 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 ARHGAP15Q53QZ3 475 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 ZNF805Q5CZA5 627 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 PRAMEF14Q5SWL7 426 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 ATG16L1Q676U5 607 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 GRAMD4Q6IC98 578 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 MFSD5Q6N075 450 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 WDR93Q6P2C0 686 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 FBXO38Q6PIJ6 1188 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 TRAT1Q6PIZ9 186 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 KLHL17Q6TDP4 642 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 ANGPTL8Q6UXH0 198 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 C16orf59Q7L2K0 433 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 CXorf67Q86X51 503 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 VRK3Q8IV63 474 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 SYNE4Q8N205 404 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 GALNT4Q8N4A0 578 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 GMCL1P1Q8NEA9 526 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 OR6C4Q8NGE1 309 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 TSPEARQ8WU66 669 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 NRG4Q8WWG1 115 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 RABGGTAQ92696 567 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 KAT5Q92993 513 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 CUL5Q93034 780 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 FATE1Q969F0 183 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 MIEF2Q96C03 454 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 IQCDQ96DY2 449 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 KTI12Q96EK9 354 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 GIMAP5Q96F15 307 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 CDCA5Q96FF9 252 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 PGAP3Q96FM1 320 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 VPS50Q96JG6 964 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 SLC39A3Q9BRY0 314 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 SPXQ9BT56 116 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 BTBD2Q9BX70 525 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 GPR87Q9BY21 358 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 ACE2Q9BYF1 805 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 ACPTQ9BZG2 426 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 REXO4Q9GZR2 422 aaKnown RBP3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 TWSG1Q9GZX9 223 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 PABPC3Q9H361 631 aaKnown RBP3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 ABHD16BQ9H3Z7 469 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 OPA3Q9H6K4 179 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 DNAJC18Q9H819 358 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 PDE11AQ9HCR9 933 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 ADARB2Q9NS39 739 aaKnown RBP3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 MSRAQ9UJ68 235 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 HOOK1Q9UJC3 728 aaKnown RBP3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 CAMK2AQ9UQM7 478 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 TRAF3IP3Q9Y228 551 aa3.86□□□□□ -1.79
HMGB1P12-201ENST00000438594 NOSIPQ9Y314 301 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms