RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 PIAS2O75928 621 aa11.75□□□□□ -0.53
RTN4-211ENST00000438462 NEBLO76041 1014 aa11.75□□□□□ -0.53
RTN4-211ENST00000438462 PRKAR1AP10644 381 aa11.75□□□□□ -0.53
RTN4-211ENST00000438462 SPATA1Q5VX52 437 aa11.75□□□□□ -0.53
RTN4-211ENST00000438462 NUGGCQ68CJ6 796 aa11.75□□□□□ -0.53
RTN4-211ENST00000438462 TAS1R3Q7RTX0 852 aa11.75□□□□□ -0.53
RTN4-211ENST00000438462 OR2T34Q8NGX1 318 aa11.75□□□□□ -0.53
RTN4-211ENST00000438462 GTF3C6Q969F1 213 aa11.75□□□□□ -0.53
RTN4-211ENST00000438462 SPATA17Q96L03 361 aa11.75□□□□□ -0.53
RTN4-211ENST00000438462 FOXP3Q9BZS1 431 aa11.75□□□□□ -0.53
RTN4-211ENST00000438462 CIPCQ9C0C6 399 aa11.75□□□□□ -0.53
RTN4-211ENST00000438462 SLC27A6Q9Y2P4 619 aa11.75□□□□□ -0.53
RTN4-211ENST00000438462 DAAM1Q9Y4D1 1078 aa11.75□□□□□ -0.53
RTN4-211ENST00000438462 LOXL2Q9Y4K0 774 aa11.75□□□□□ -0.53
RTN4-211ENST00000438462 LACTBL1A8MY62 500 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 C10orf142B7Z368 130 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 PRSS44E7EML9 344 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 AGRPO00253 132 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 CD99P14209 185 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 CD82P27701 267 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 ETV5P41161 510 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 LEPRP48357 1165 aaKnown RBP11.74□□□□□ -0.53
RTN4-211ENST00000438462 ATP1A2P50993 1020 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 FXR2P51116 673 aaKnown RBP eCLIP11.74□□□□□ -0.537e-14■□□□□ 9.2
RTN4-211ENST00000438462 CCR5P51681 352 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 TAF10Q12962 218 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 PRR30Q53SZ7 412 aaPredicted RBP11.74□□□□□ -0.53
RTN4-211ENST00000438462 ZNF776Q68DI1 518 aaPredicted RBP11.74□□□□□ -0.53
RTN4-211ENST00000438462 TCTN3Q6NUS6 607 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 USP30Q70CQ3 517 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 ANKS1BQ7Z6G8 1248 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 IQCHQ86VS3 1027 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 RBBP8NLQ8NC74 664 aaPredicted RBP11.74□□□□□ -0.53
RTN4-211ENST00000438462 FUBP3Q96I24 572 aaKnown RBP eCLIP11.74□□□□□ -0.53
RTN4-211ENST00000438462 DUSP23Q9BVJ7 150 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 SLC29A3Q9BZD2 475 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 STRADBQ9C0K7 418 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 PABPC3Q9H361 631 aaKnown RBP11.74□□□□□ -0.53
RTN4-211ENST00000438462 ELOVL2Q9NXB9 296 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 FBXL12Q9NXK8 326 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 FBXO10Q9UK96 956 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 BRPF3Q9ULD4 1205 aa11.74□□□□□ -0.53
RTN4-211ENST00000438462 ATRQ13535 2644 aa11.73□□□□□ -0.53
RTN4-211ENST00000438462 EME2A4GXA9 379 aaPredicted RBP11.73□□□□□ -0.53
RTN4-211ENST00000438462 KIAA1324LA8MWY0 1029 aaPredicted RBP11.73□□□□□ -0.53
RTN4-211ENST00000438462 C9orf172C9J069 976 aa11.73□□□□□ -0.53
RTN4-211ENST00000438462 DUX1O43812 170 aa11.73□□□□□ -0.53
RTN4-211ENST00000438462 CD1EP15812 388 aa11.73□□□□□ -0.53
RTN4-211ENST00000438462 TAF6P49848 677 aa11.73□□□□□ -0.53
RTN4-211ENST00000438462 HDAC4P56524 1084 aa11.73□□□□□ -0.53
RTN4-211ENST00000438462 PPP2CBP62714 309 aa11.73□□□□□ -0.53
RTN4-211ENST00000438462 PPP2CAP67775 309 aa11.73□□□□□ -0.53
RTN4-211ENST00000438462 CDC20Q12834 499 aa11.73□□□□□ -0.53
RTN4-211ENST00000438462 IFRD2Q12894 506 aaPredicted RBP11.73□□□□□ -0.53
RTN4-211ENST00000438462 FGL2Q14314 439 aa11.73□□□□□ -0.53
RTN4-211ENST00000438462 ENOX2Q16206 610 aaKnown RBP11.73□□□□□ -0.53
RTN4-211ENST00000438462 DEFB109BQ30KR1 87 aa11.73□□□□□ -0.53
RTN4-211ENST00000438462 ZCCHC8Q6NZY4 707 aaKnown RBP11.73□□□□□ -0.53
RTN4-211ENST00000438462 CDH24Q86UP0 819 aa11.73□□□□□ -0.53
RTN4-211ENST00000438462 RTTNQ86VV8 2226 aa11.73□□□□□ -0.53
RTN4-211ENST00000438462 WDR48Q8TAF3 677 aa11.73□□□□□ -0.53
RTN4-211ENST00000438462 USP7Q93009 1102 aa11.73□□□□□ -0.53
RTN4-211ENST00000438462 TMUB1Q9BVT8 246 aa11.73□□□□□ -0.53
RTN4-211ENST00000438462 FBRSQ9HAH7 460 aa11.73□□□□□ -0.53
RTN4-211ENST00000438462 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.73□□□□□ -0.538e-8■■■■■ 56.1
RTN4-211ENST00000438462 DDX43Q9NXZ2 648 aaKnown RBP11.73□□□□□ -0.53
RTN4-211ENST00000438462 A0A1W2PP55 124 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.72□□□□□ -0.53
RTN4-211ENST00000438462 SCAMP1O15126 338 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 MUSKO15146 869 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 NKX2-8O15522 239 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 WIPF1O43516 503 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 HCRTO43612 131 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 GREM1O60565 184 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 CYP11B2P19099 503 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 ANXA13P27216 316 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 PTGER4P35408 488 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 MAGEA11P43364 429 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 ARID5AQ03989 594 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 OVGP1Q12889 678 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 EIF4HQ15056 248 aaKnown RBP11.72□□□□□ -0.53
RTN4-211ENST00000438462 E2F5Q15329 346 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 FNDC3BQ53EP0 1204 aaKnown RBP11.72□□□□□ -0.53
RTN4-211ENST00000438462 JADE1Q6IE81 842 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 CCDC13Q8IYE1 715 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 GLIS1Q8NBF1 620 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 NKD1Q969G9 470 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 SLITRK1Q96PX8 696 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 ACBD6Q9BR61 282 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 CCSER1Q9C0I3 900 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 PRSS16Q9NQE7 514 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 EHD2Q9NZN4 543 aa11.72□□□□□ -0.53
RTN4-211ENST00000438462 NEMP2A6NFY4 417 aa11.71□□□□□ -0.53
RTN4-211ENST00000438462 CCDC169A6NNP5 214 aa11.71□□□□□ -0.53
RTN4-211ENST00000438462 MKRN2OSH3BPM6 223 aa11.71□□□□□ -0.53
RTN4-211ENST00000438462 STMND1H3BQB6 276 aa11.71□□□□□ -0.53
RTN4-211ENST00000438462 CLTAP09496 248 aa11.71□□□□□ -0.53
RTN4-211ENST00000438462 OAS2P29728 719 aaKnown RBP11.71□□□□□ -0.53
RTN4-211ENST00000438462 ADD1P35611 737 aaKnown RBP11.71□□□□□ -0.53
RTN4-211ENST00000438462 MAPK10P53779 464 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms