RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 HNRNPCL3B7ZW38 293 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 HNRNPCL4P0DMR1 293 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 VAV1P15498 845 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 HAUS6Q7Z4H7 955 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 NSUN6Q8TEA1 469 aaKnown RBP11.81□□□□□ -0.52
PTCH1-209ENST00000437951 GSDMCQ9BYG8 508 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 CDC42EP4Q9H3Q1 356 aaKnown RBP11.81□□□□□ -0.52
PTCH1-209ENST00000437951 SNX7Q9UNH6 387 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 TELO2Q9Y4R8 837 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 ACTL7BQ9Y614 415 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 RPN2P04844 631 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 HOXB8P17481 243 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-209ENST00000437951 ZRANB3Q5FWF4 1079 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 RBM44Q6ZP01 1051 aaKnown RBP11.81□□□□□ -0.52
PTCH1-209ENST00000437951 DHDDSQ86SQ9 333 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 FIG4Q92562 907 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 PADI4Q9UM07 663 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.81□□□□□ -0.52
PTCH1-209ENST00000437951 SPATA31E1Q6ZUB1 1445 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 CCNKO75909 580 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 OR6B1O95007 311 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 UQCRBP14927 111 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 ATF4P18848 351 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-209ENST00000437951 FIGNQ5HY92 759 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 C11orf63Q6NUN7 778 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 ARMC6Q6NXE6 501 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 STK32CQ86UX6 486 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 KIF12Q96FN5 646 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 YIPF2Q9BWQ6 316 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 COPS7BQ9H9Q2 264 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-209ENST00000437951 DYRK1BQ9Y463 629 aa11.81□□□□□ -0.52
PTCH1-209ENST00000437951 ANKRD12Q6UB98 2062 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 SMIM22K7EJ46 135 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 FCHO1O14526 889 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 MYL3P08590 195 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 SCNN1DP51172 638 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 EPHA7Q15375 998 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 OLFML2AQ68BL7 652 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 RIPOR1Q6ZS17 1223 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 LRRC20Q8TCA0 184 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 TP53INP1Q96A56 240 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 CPNE1Q99829 537 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 SLC38A7Q9NVC3 462 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 ACOT9Q9Y305 439 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 PCDHGA10Q9Y5H3 936 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 PTGES3LE9PB15 166 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 APOL3O95236 402 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 VCLP18206 1134 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 ITIH1P19827 911 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 GTF2E2P29084 291 aaKnown RBP11.8□□□□□ -0.52
PTCH1-209ENST00000437951 PTSQ03393 145 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 INTS11Q5TA45 600 aaKnown RBP11.8□□□□□ -0.52
PTCH1-209ENST00000437951 ERAP2Q6P179 960 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 RAD9BQ6WBX8 426 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 SLC38A2Q96QD8 506 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 GSSP48637 474 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 STOX1Q6ZVD7 989 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 PGBD3Q8N328 593 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 ZNF276Q8N554 614 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 PGM2Q96G03 612 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 ERMAPQ96PL5 475 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-209ENST00000437951 NUDT12Q9BQG2 462 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 ZNF518BQ9C0D4 1074 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 GREM2Q9H772 168 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 LOC100506127A0A0U1RQW1 187 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 SNX4O95219 450 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 CRTAMO95727 393 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 ETS1P14921 441 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 EPHB2P29323 1055 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 NEK3P51956 506 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 GALNT3Q14435 633 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 TTLL4Q14679 1199 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 MEIOBQ8N635 442 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 WDR48Q8TAF3 677 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 RMDN3Q96TC7 470 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 DGCR6LQ9BY27 220 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 MIEF1Q9NQG6 463 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.8□□□□□ -0.52
PTCH1-209ENST00000437951 SRP68Q9UHB9 627 aaKnown RBP11.8□□□□□ -0.52
PTCH1-209ENST00000437951 H3BN98 237 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 TRDMT1O14717 391 aaKnown RBP11.8□□□□□ -0.52
PTCH1-209ENST00000437951 BBOX1O75936 387 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 ASNSP08243 561 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 HPGDP15428 266 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 GARTP22102 1010 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 FXR1P51114 621 aaKnown RBP eCLIP11.8□□□□□ -0.52
PTCH1-209ENST00000437951 NCOA4Q13772 614 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 EIF2S3LQ2VIR3 472 aaKnown RBP11.8□□□□□ -0.52
PTCH1-209ENST00000437951 EPC2Q52LR7 807 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 PGBD2Q6P3X8 592 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 IPMKQ8NFU5 416 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 RNF145Q96MT1 663 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 ZNF224Q9NZL3 707 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 CCNE2O96020 404 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 OGNP20774 298 aaKnown RBP11.8□□□□□ -0.52
PTCH1-209ENST00000437951 DNAJB2P25686 324 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 CAMK2GQ13555 558 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-209ENST00000437951 DOK7Q18PE1 504 aa11.8□□□□□ -0.52
PTCH1-209ENST00000437951 ZC2HC1CQ53FD0 456 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-209ENST00000437951 NT5C1AQ9BXI3 368 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms