RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 EXOC1Q9NV70 894 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 MARCH2Q9P0N8 246 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 ANKRD6Q9Y2G4 727 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 FRMD4BQ9Y2L6 1034 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 USP3Q9Y6I4 520 aa12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 ANKRD11Q6UB99 2663 aaPredicted RBP12.15□□□□□ -0.46
CHRNA1-207ENST00000435083 CKAP5Q14008 2032 aa12.15□□□□□ -0.47
CHRNA1-207ENST00000435083 WDFY3Q8IZQ1 3526 aa12.15□□□□□ -0.47
CHRNA1-207ENST00000435083 TMEM131Q92545 1883 aa12.14□□□□□ -0.47
CHRNA1-207ENST00000435083 PDXKO00764 312 aa12.14□□□□□ -0.47
CHRNA1-207ENST00000435083 KLRC4O43908 158 aa12.14□□□□□ -0.47
CHRNA1-207ENST00000435083 TSPAN3O60637 253 aa12.14□□□□□ -0.47
CHRNA1-207ENST00000435083 VAMP7P51809 220 aa12.14□□□□□ -0.47
CHRNA1-207ENST00000435083 C1orf220Q5T0J3 134 aa12.14□□□□□ -0.47
CHRNA1-207ENST00000435083 ARHGAP18Q8N392 663 aa12.14□□□□□ -0.47
CHRNA1-207ENST00000435083 ZNF366Q8N895 744 aa12.14□□□□□ -0.47
CHRNA1-207ENST00000435083 RBBP8NLQ8NC74 664 aaPredicted RBP12.14□□□□□ -0.47
CHRNA1-207ENST00000435083 HEXIM2Q96MH2 286 aaKnown RBP12.14□□□□□ -0.47
CHRNA1-207ENST00000435083 MMRN2Q9H8L6 949 aa12.14□□□□□ -0.47
CHRNA1-207ENST00000435083 TM9SF3Q9HD45 589 aa12.14□□□□□ -0.47
CHRNA1-207ENST00000435083 DKK4Q9UBT3 224 aa12.14□□□□□ -0.47
CHRNA1-207ENST00000435083 SERTAD1Q9UHV2 236 aa12.14□□□□□ -0.47
CHRNA1-207ENST00000435083 TNFSF14O43557 240 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 DKK1O94907 266 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 FSBPO95073 299 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 PDIA4P13667 645 aaKnown RBP12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 ME1P48163 572 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 GCLMP48507 274 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 YWHAGP61981 247 aaKnown RBP eCLIP12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 CAMK2GQ13555 558 aaPredicted RBP12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 KMT5BQ4FZB7 885 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 MPPE1Q53F39 396 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 LAYNQ6UX15 382 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 TAS1R2Q8TE23 839 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 CYB5D2Q8WUJ1 264 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 ARID3AQ99856 593 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 NIF3L1Q9GZT8 377 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 BTBD1Q9H0C5 482 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 PCDHA7Q9UN72 937 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 PLA2G4CQ9UP65 541 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 CALUO43852 315 aaPredicted RBP12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 SEMA4FO95754 770 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 TRIM49P0CI25 452 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 TRIM49CP0CI26 452 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 GRK6P43250 576 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 GRIA4P48058 902 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 CCT8P50990 548 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 IL9RQ01113 521 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 CAMK2BQ13554 666 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 RESP18Q5W5W9 173 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 DHRS13Q6UX07 377 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 CHST9Q7L1S5 443 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 ADAT2Q7Z6V5 191 aaKnown RBP12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 PIGZQ86VD9 579 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 PDCD7Q8N8D1 485 aaKnown RBP12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 CCDC150Q8NCX0 1101 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 ENGASEQ8NFI3 743 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 TMEM174Q8WUU8 243 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 PLD4Q96BZ4 506 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 BIRC7Q96CA5 298 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 CRELD1Q96HD1 420 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 DCBLD2Q96PD2 775 aa12.13□□□□□ -0.47
CHRNA1-207ENST00000435083 NUMA1Q14980 2115 aa12.12□□□□□ -0.47
CHRNA1-207ENST00000435083 H0Y8X5 98 aa12.12□□□□□ -0.47
CHRNA1-207ENST00000435083 DNTTP04053 509 aa12.12□□□□□ -0.47
CHRNA1-207ENST00000435083 SLFN14P0C7P3 912 aa12.12□□□□□ -0.47
CHRNA1-207ENST00000435083 HOXD9P28356 352 aaPredicted RBP12.12□□□□□ -0.47
CHRNA1-207ENST00000435083 HLA-FP30511 346 aa12.12□□□□□ -0.47
CHRNA1-207ENST00000435083 HARS2P49590 506 aaKnown RBP12.12□□□□□ -0.47
CHRNA1-207ENST00000435083 RPS14P62263 151 aaKnown RBP12.12□□□□□ -0.47
CHRNA1-207ENST00000435083 PPP3CAQ08209 521 aa12.12□□□□□ -0.47
CHRNA1-207ENST00000435083 FAM217AQ8IXS0 508 aa12.12□□□□□ -0.47
CHRNA1-207ENST00000435083 WFIKKN2Q8TEU8 576 aa12.12□□□□□ -0.47
CHRNA1-207ENST00000435083 IGSF8Q969P0 613 aa12.12□□□□□ -0.47
CHRNA1-207ENST00000435083 PAGE5Q96GU1 130 aa12.12□□□□□ -0.47
CHRNA1-207ENST00000435083 TMEM245Q9H330 911 aa12.12□□□□□ -0.47
CHRNA1-207ENST00000435083 OSGEPQ9NPF4 335 aa12.12□□□□□ -0.47
CHRNA1-207ENST00000435083 ABCB8Q9NUT2 735 aa12.12□□□□□ -0.47
CHRNA1-207ENST00000435083 ACACAQ13085 2346 aa12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 NBEAQ8NFP9 2946 aa12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 PCDHGA12O60330 932 aa12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 ZIC2O95409 532 aaPredicted RBP12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 KRT13P13646 458 aa12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 CD27P26842 260 aa12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 TKTL1P51854 596 aa12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 SLC8A3P57103 927 aa12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 TRIP4Q15650 581 aaPredicted RBP12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 SMAD1Q15797 465 aaKnown RBP12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 PTPRNQ16849 979 aa12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 RAB41Q5JT25 222 aa12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 KCNT1Q5JUK3 1230 aa12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 FMNL3Q8IVF7 1028 aa12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 SCUBE3Q8IX30 993 aa12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 NDRG1Q92597 394 aaKnown RBP12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 TMA16Q96EY4 203 aaKnown RBP12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 ULBP1Q9BZM6 244 aa12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 UBXN6Q9BZV1 441 aa12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 PRSS16Q9NQE7 514 aa12.11□□□□□ -0.47
CHRNA1-207ENST00000435083 FTSJ1Q9UET6 329 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms