RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 HAS3O00219 553 aa19.19■□□□□ 0.66
CLK1-205ENST00000434813 CBX6O95503 412 aa19.19■□□□□ 0.66
CLK1-205ENST00000434813 MLNP12872 115 aa19.19■□□□□ 0.66
CLK1-205ENST00000434813 APLP1P51693 650 aa19.19■□□□□ 0.66
CLK1-205ENST00000434813 SARNPP82979 210 aaKnown RBP19.19■□□□□ 0.66
CLK1-205ENST00000434813 CDK16Q00536 496 aa19.19■□□□□ 0.66
CLK1-205ENST00000434813 CRHR2Q13324 411 aa19.19■□□□□ 0.66
CLK1-205ENST00000434813 TRMT10BQ6PF06 316 aaKnown RBP19.19■□□□□ 0.66
CLK1-205ENST00000434813 CYS1Q717R9 158 aa19.19■□□□□ 0.66
CLK1-205ENST00000434813 BNIPLQ7Z465 357 aa19.19■□□□□ 0.66
CLK1-205ENST00000434813 OSTM1Q86WC4 334 aa19.19■□□□□ 0.66
CLK1-205ENST00000434813 APBA2Q99767 749 aa19.19■□□□□ 0.66
CLK1-205ENST00000434813 DUSP16Q9BY84 665 aa19.19■□□□□ 0.66
CLK1-205ENST00000434813 MTO1Q9Y2Z2 717 aaKnown RBP19.19■□□□□ 0.66
CLK1-205ENST00000434813 MFHAS1Q9Y4C4 1052 aa19.19■□□□□ 0.66
CLK1-205ENST00000434813 NUMBLQ9Y6R0 609 aa19.19■□□□□ 0.66
CLK1-205ENST00000434813 PCNTO95613 3336 aa19.19■□□□□ 0.66
CLK1-205ENST00000434813 A0A0G2JND7 137 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 FAM155AB1AL88 458 aaPredicted RBP19.18■□□□□ 0.66
CLK1-205ENST00000434813 MFSD11O43934 449 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 UGT1A9O60656 530 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 DNAJC6O75061 913 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 PSEN2P49810 448 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 SERPINB9P50453 376 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 SLC8A3P57103 927 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 MRPS5P82675 430 aaKnown RBP19.18■□□□□ 0.66
CLK1-205ENST00000434813 CCL14Q16627 93 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 ANKRD20A2Q5SQ80 823 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 ANKRD20A1Q5TYW2 823 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 ANKRD20A3Q5VUR7 823 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 STEAP4Q687X5 459 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 OLFML2BQ68BL8 750 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 DENND5BQ6ZUT9 1274 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 TRIM42Q8IWZ5 723 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 CCDC33Q8N5R6 958 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 NT5C3BQ969T7 300 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 STAMBPL1Q96FJ0 436 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 UGT1A7Q9HAW7 530 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 UGT1A10Q9HAW8 530 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 UGT1A8Q9HAW9 530 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 KCNK13Q9HB14 408 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 EIF2B3Q9NR50 452 aaKnown RBP19.18■□□□□ 0.66
CLK1-205ENST00000434813 IPPQ9Y573 584 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 DLDP09622 509 aaKnown RBP19.18■□□□□ 0.66
CLK1-205ENST00000434813 ZNF865P0CJ78 1059 aaPredicted RBP19.18■□□□□ 0.66
CLK1-205ENST00000434813 NEFHP12036 1026 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 NPR3P17342 541 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 ARFIP2P53365 341 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 LILRA4P59901 499 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 C1QTNF8P60827 252 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 BMPR2Q13873 1038 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 NBPF20Q3BBV1 942 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 PAXIP1Q6ZW49 1069 aaPredicted RBP19.18■□□□□ 0.66
CLK1-205ENST00000434813 KCTD13Q8WZ19 329 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 SKA1Q96BD8 255 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 FAM149B1Q96BN6 582 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 TRIM56Q9BRZ2 755 aaKnown RBP19.18■□□□□ 0.66
CLK1-205ENST00000434813 MOCS1Q9NZB8 636 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 L3MBTL1Q9Y468 752 aa19.18■□□□□ 0.66
CLK1-205ENST00000434813 H3BRJ5 948 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 TREHO43280 583 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 LRPAP1P30533 357 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 NOS2P35228 1153 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 GRIA1P42261 906 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 SMG8Q8ND04 991 aaKnown RBP19.17■□□□□ 0.66
CLK1-205ENST00000434813 RNF139Q8WU17 664 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 OXNAD1Q96HP4 312 aaPredicted RBP19.17■□□□□ 0.66
CLK1-205ENST00000434813 C7orf26Q96N11 449 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 NPY6RQ99463 290 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 TBC1D10AQ9BXI6 508 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 TMEM120AQ9BXJ8 343 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 TLE6Q9H808 572 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 NOP53Q9NZM5 478 aaKnown RBP19.17■□□□□ 0.66
CLK1-205ENST00000434813 TSC2P49815 1807 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 HMX2A2RU54 273 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 OPHN1O60890 802 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 STK10O94804 968 aaKnown RBP19.17■□□□□ 0.66
CLK1-205ENST00000434813 HAUS5O94927 633 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 CNTFP26441 200 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 PTPN4P29074 926 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 GLUD2P49448 558 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 CRYBB1P53674 252 aaPredicted RBP19.17■□□□□ 0.66
CLK1-205ENST00000434813 TIFABQ6ZNK6 161 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 RPAINQ86UA6 219 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 ARRDC4Q8NCT1 418 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 DEPDC1BQ8WUY9 529 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 LENG1Q96BZ8 264 aaPredicted RBP19.17■□□□□ 0.66
CLK1-205ENST00000434813 SLC2A13Q96QE2 648 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 LGMNQ99538 433 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 SIRPGQ9P1W8 387 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 HEY2Q9UBP5 337 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 STAP1Q9ULZ2 295 aa19.17■□□□□ 0.66
CLK1-205ENST00000434813 ALDH1A2O94788 518 aa19.16■□□□□ 0.66
CLK1-205ENST00000434813 FAM163BP0C2L3 166 aa19.16■□□□□ 0.66
CLK1-205ENST00000434813 CPT1AP50416 773 aa19.16■□□□□ 0.66
CLK1-205ENST00000434813 DCAF6Q58WW2 860 aa19.16■□□□□ 0.66
CLK1-205ENST00000434813 LRRC8BQ6P9F7 803 aa19.16■□□□□ 0.66
CLK1-205ENST00000434813 MARK2Q7KZI7 788 aaKnown RBP19.16■□□□□ 0.66
CLK1-205ENST00000434813 RAB3IL1Q8TBN0 382 aa19.16■□□□□ 0.66
CLK1-205ENST00000434813 AP5M1Q9H0R1 490 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms