RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 CELF1Q92879 486 aaKnown RBP3.89□□□□□ -1.79
CLK1-204ENST00000432425 PCGF6Q9BYE7 350 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 CDCP1Q9H5V8 836 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 AGO4Q9HCK5 861 aaKnown RBP3.89□□□□□ -1.79
CLK1-204ENST00000432425 TMEM45AQ9NWC5 275 aa3.89□□□□□ -1.79
CLK1-204ENST00000432425 CCDC187A0A096LP49 1063 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.88□□□□□ -1.79
CLK1-204ENST00000432425 SLC22A23A1A5C7 686 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 F8W810 466 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 PODXLO00592 558 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 PRYO14603 147 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 CAND2O75155 1236 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 FGF18O76093 207 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 ALADP13716 330 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 ST6GAL1P15907 406 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 TFEBP19484 476 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 EEF1GP26641 437 aaKnown RBP3.88□□□□□ -1.79
CLK1-204ENST00000432425 HOXA7P31268 230 aaPredicted RBP3.88□□□□□ -1.79
CLK1-204ENST00000432425 IDUAP35475 653 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 SRSF1Q07955 248 aaKnown RBP eCLIP3.88□□□□□ -1.792e-6■□□□□ 10.6
CLK1-204ENST00000432425 GAB1Q13480 694 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 MTX1Q13505 466 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 FHL1Q13642 323 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 CCDC181Q5TID7 509 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 KYAT3Q6YP21 454 aaKnown RBP3.88□□□□□ -1.79
CLK1-204ENST00000432425 PIP4P1Q86T03 277 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 PIM3Q86V86 326 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 NSMCE1Q8WV22 266 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 GLMPQ8WWB7 406 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 KAT2BQ92831 832 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 P2RY11Q96G91 374 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 TTLL2Q9BWV7 592 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 TMEM8AQ9HCN3 771 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 FBXO28Q9NVF7 368 aa3.88□□□□□ -1.79
CLK1-204ENST00000432425 IPO11Q9UI26 975 aaKnown RBP3.88□□□□□ -1.79
CLK1-204ENST00000432425 H3BNX3 289 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 CTIFO43310 598 aaKnown RBP3.87□□□□□ -1.79
CLK1-204ENST00000432425 NTN1O95631 604 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 TM4SF4P48230 202 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 CSHL1Q14406 222 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 IZUMO3Q5VZ72 239 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 PIK3AP1Q6ZUJ8 805 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 ADGRF4Q8IZF3 695 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 OR2C3Q8N628 320 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 ZNF548Q8NEK5 533 aaPredicted RBP3.87□□□□□ -1.79
CLK1-204ENST00000432425 PARD3BQ8TEW8 1205 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 ASB12Q8WXK4 309 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 ZNF845Q96IR2 970 aaPredicted RBP3.87□□□□□ -1.79
CLK1-204ENST00000432425 VCPIP1Q96JH7 1222 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 CCDC138Q96M89 665 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 GDF15Q99988 308 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 WACQ9BTA9 647 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 TUBB6Q9BUF5 446 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 CERS4Q9HA82 394 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 MLXIPLQ9NP71 852 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 CA14Q9ULX7 337 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.87□□□□□ -1.79
CLK1-204ENST00000432425 SQORQ9Y6N5 450 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 SPATA31A5Q5VU36 1347 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 EMSYQ7Z589 1322 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 SPATA31A7Q8IWB4 1347 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 PNMA6EA0A0J9YXQ4 647 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 J3KTA2 159 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 IKBKBO14920 756 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 HNRNPDLO14979 420 aaKnown RBP3.87□□□□□ -1.79
CLK1-204ENST00000432425 TULP3O75386 442 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 MYL1P05976 194 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 ENO1P06733 434 aaKnown RBP3.87□□□□□ -1.79
CLK1-204ENST00000432425 SNHG28P0DPA3 235 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 AKR1A1P14550 325 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 AGTR2P50052 363 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 AK2P54819 239 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 B4GALNT1Q00973 533 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 PICALMQ13492 652 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 ANXA2RQ3ZCQ2 193 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 ARL6IP4Q66PJ3 421 aaKnown RBP3.87□□□□□ -1.79
CLK1-204ENST00000432425 DHRS13Q6UX07 377 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 COLCA1Q6ZS62 124 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 RFX6Q8HWS3 928 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 GJA10Q969M2 543 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 TNIP3Q96KP6 325 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 MOV10Q9HCE1 1003 aaKnown RBP3.87□□□□□ -1.79
CLK1-204ENST00000432425 NECTIN3Q9NQS3 549 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 PAPOLBQ9NRJ5 636 aaKnown RBP3.87□□□□□ -1.79
CLK1-204ENST00000432425 HELLSQ9NRZ9 838 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 TM7SF3Q9NS93 570 aa3.87□□□□□ -1.79
CLK1-204ENST00000432425 UBE2J1Q9Y385 318 aaPredicted RBP3.87□□□□□ -1.79
CLK1-204ENST00000432425 FAM90A10PA6NDY2 464 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 NPC1O15118 1278 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 INSIG1O15503 277 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 KCNAB3O43448 404 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 PRC1O43663 620 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 PSG1P11464 419 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 KRTAP5-9P26371 169 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 STAT6P42226 847 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 ZNF84P51523 738 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 FOXG1P55316 489 aaPredicted RBP3.86□□□□□ -1.79
CLK1-204ENST00000432425 LAS2Q8IYD9 372 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 MMP21Q8N119 569 aa3.86□□□□□ -1.79
CLK1-204ENST00000432425 WIPF2Q8TF74 440 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms