RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 USP17L7P0C7H9 530 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 CCDC166P0CW27 439 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 ESRRAP11474 423 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-202ENST00000432306 KRT4P19013 534 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 ADRA1DP25100 572 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 KRT20P35900 424 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 SLC16A2P36021 539 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 GPX6P59796 221 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 UBXN2AP68543 259 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 CAP1Q01518 475 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 BTKQ06187 659 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 CDC16Q13042 620 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 AGERQ15109 404 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 SH2D4BQ5SQS7 431 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 KCTD1Q719H9 257 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 RTL10Q7L3V2 364 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 RCOR2Q8IZ40 523 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 ST13P4Q8IZP2 240 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-202ENST00000432306 C4orf33Q8N1A6 199 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 ATP11CQ8NB49 1132 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 KCNN1Q92952 543 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 OXNAD1Q96HP4 312 aaPredicted RBP8.34□□□□□ -1.07
VTI1A-202ENST00000432306 DYDC2Q96IM9 177 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 MAML3Q96JK9 1138 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 BTBD9Q96Q07 612 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 FNBP1Q96RU3 617 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 TSSK1BQ9BXA7 367 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 C1QTNF2Q9BXJ5 285 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 UNC45AQ9H3U1 944 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 CYP4F11Q9HBI6 524 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 PTTG2Q9NZH5 202 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 GJD2Q9UKL4 321 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 JAG2Q9Y219 1238 aa8.34□□□□□ -1.07
VTI1A-202ENST00000432306 CLUHO75153 1309 aa8.34□□□□□ -1.08
VTI1A-202ENST00000432306 SZT2Q5T011 3432 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 CCL15-CCL14A0A0B4J2E2 113 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 A0A1W2PPM1 405 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 DENND3A2RUS2 1198 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 HGSO14964 777 aaPredicted RBP8.33□□□□□ -1.08
VTI1A-202ENST00000432306 ZSCAN9O15535 394 aaPredicted RBP8.33□□□□□ -1.08
VTI1A-202ENST00000432306 USP2O75604 605 aaPredicted RBP8.33□□□□□ -1.08
VTI1A-202ENST00000432306 PYGLP06737 847 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 CPA3P15088 417 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 PGM1P36871 562 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 RGS2P41220 211 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 GCLMP48507 274 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 NCKAP1LP55160 1127 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 RTP1P59025 263 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 BPIFB4P59827 614 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 MPP1Q00013 466 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 ADCY1Q08828 1119 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 THOC5Q13769 683 aaKnown RBP8.33□□□□□ -1.08
VTI1A-202ENST00000432306 TNFAIP1Q13829 316 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 TRIP13Q15645 432 aaPredicted RBP8.33□□□□□ -1.08
VTI1A-202ENST00000432306 CCL15Q16663 113 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 ATP13A4Q4VNC1 1196 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 MAP3K21Q5TCX8 1036 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 C6orf163Q5TEZ5 329 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 PRUNE1Q86TP1 453 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 NCAPG2Q86XI2 1143 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 FBXO11Q86XK2 927 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 PDSS2Q86YH6 399 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 PHF13Q86YI8 300 aaPredicted RBP8.33□□□□□ -1.08
VTI1A-202ENST00000432306 TRIM42Q8IWZ5 723 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 LRRC43Q8N309 656 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 MIPOL1Q8TD10 442 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 TCP10LQ8TDR4 215 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 DCAKDQ8WVC6 231 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 TRIM63Q969Q1 353 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 APOPT1Q96IL0 206 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 NLRP4Q96MN2 994 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 NT5C1BQ96P26 610 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 TUBGCP5Q96RT8 1024 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 RIT2Q99578 217 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 WDR18Q9BV38 432 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 TMEM120AQ9BXJ8 343 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 PRO3102Q9H379 93 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 STN1Q9H668 368 aaKnown RBP8.33□□□□□ -1.08
VTI1A-202ENST00000432306 ELP3Q9H9T3 547 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 PLEKHA5Q9HAU0 1116 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 TCF7L1Q9HCS4 588 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 MRPL47Q9HD33 250 aaKnown RBP8.33□□□□□ -1.08
VTI1A-202ENST00000432306 TRMT13Q9NUP7 481 aaKnown RBP8.33□□□□□ -1.08
VTI1A-202ENST00000432306 DNAJC17Q9NVM6 304 aaKnown RBP8.33□□□□□ -1.08
VTI1A-202ENST00000432306 PLK2Q9NYY3 685 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 HSPBP1Q9NZL4 362 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 SUN2Q9UH99 717 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 PCDHB2Q9Y5E7 798 aa8.33□□□□□ -1.08
VTI1A-202ENST00000432306 A0A1B0GVG6 124 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 EIF4E1BA6NMX2 242 aaKnown RBP8.32□□□□□ -1.08
VTI1A-202ENST00000432306 FAM25EA8MYX2 175 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 FCHO1O14526 889 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 SPAG6O75602 509 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 PLS3P13797 630 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 STIP1P31948 543 aaKnown RBP8.32□□□□□ -1.08
VTI1A-202ENST00000432306 GRK6P43250 576 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 VCPP55072 806 aaKnown RBP8.32□□□□□ -1.08
VTI1A-202ENST00000432306 SULT2A1Q06520 285 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 ASPHQ12797 758 aa8.32□□□□□ -1.08
VTI1A-202ENST00000432306 TRIM32Q13049 653 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms