RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 IKBKBO14920 756 aa23.15■■□□□ 1.3
PTPRA-207ENST00000431048 TSPAN3O60637 253 aa23.15■■□□□ 1.3
PTPRA-207ENST00000431048 CD27P26842 260 aa23.15■■□□□ 1.3
PTPRA-207ENST00000431048 CTSKP43235 329 aa23.15■■□□□ 1.3
PTPRA-207ENST00000431048 ABCG1P45844 678 aa23.15■■□□□ 1.3
PTPRA-207ENST00000431048 STK38Q15208 465 aa23.15■■□□□ 1.3
PTPRA-207ENST00000431048 INAVAQ3KP66 663 aa23.15■■□□□ 1.3
PTPRA-207ENST00000431048 SV2AQ7L0J3 742 aa23.15■■□□□ 1.3
PTPRA-207ENST00000431048 SORCS1Q8WY21 1168 aa23.15■■□□□ 1.3
PTPRA-207ENST00000431048 SNX19Q92543 992 aa23.15■■□□□ 1.3
PTPRA-207ENST00000431048 NT5C1AQ9BXI3 368 aa23.15■■□□□ 1.3
PTPRA-207ENST00000431048 TMEM245Q9H330 911 aa23.15■■□□□ 1.3
PTPRA-207ENST00000431048 CYP3A43Q9HB55 503 aa23.15■■□□□ 1.3
PTPRA-207ENST00000431048 RASAL2Q9UJF2 1139 aa23.15■■□□□ 1.3
PTPRA-207ENST00000431048 PCDHGA1Q9Y5H4 931 aa23.15■■□□□ 1.3
PTPRA-207ENST00000431048 H0Y8X5 98 aa23.14■■□□□ 1.29
PTPRA-207ENST00000431048 HLA-EP13747 358 aa23.14■■□□□ 1.29
PTPRA-207ENST00000431048 DLG4P78352 724 aa23.14■■□□□ 1.29
PTPRA-207ENST00000431048 EFEMP1Q12805 493 aa23.14■■□□□ 1.29
PTPRA-207ENST00000431048 DHRS13Q6UX07 377 aa23.14■■□□□ 1.29
PTPRA-207ENST00000431048 DENND1CQ8IV53 801 aa23.14■■□□□ 1.29
PTPRA-207ENST00000431048 LSM14AQ8ND56 463 aaKnown RBP23.14■■□□□ 1.29
PTPRA-207ENST00000431048 BIRC7Q96CA5 298 aa23.14■■□□□ 1.29
PTPRA-207ENST00000431048 BACH2Q9BYV9 841 aa23.14■■□□□ 1.29
PTPRA-207ENST00000431048 UBXN6Q9BZV1 441 aa23.14■■□□□ 1.29
PTPRA-207ENST00000431048 BTBD1Q9H0C5 482 aa23.14■■□□□ 1.29
PTPRA-207ENST00000431048 MTMR6Q9Y217 621 aa23.14■■□□□ 1.29
PTPRA-207ENST00000431048 SPTLC2O15270 562 aa23.13■■□□□ 1.29
PTPRA-207ENST00000431048 SEMA4FO95754 770 aa23.13■■□□□ 1.29
PTPRA-207ENST00000431048 CDK4P11802 303 aa23.13■■□□□ 1.29
PTPRA-207ENST00000431048 ARID5AQ03989 594 aa23.13■■□□□ 1.29
PTPRA-207ENST00000431048 SPOPLQ6IQ16 392 aa23.13■■□□□ 1.29
PTPRA-207ENST00000431048 ARHGAP18Q8N392 663 aa23.13■■□□□ 1.29
PTPRA-207ENST00000431048 DDI1Q8WTU0 396 aa23.13■■□□□ 1.29
PTPRA-207ENST00000431048 SGK2Q9HBY8 427 aa23.13■■□□□ 1.29
PTPRA-207ENST00000431048 STRIP2Q9ULQ0 834 aa23.13■■□□□ 1.29
PTPRA-207ENST00000431048 NUMA1Q14980 2115 aa23.12■■□□□ 1.29
PTPRA-207ENST00000431048 KCNK3O14649 394 aa23.12■■□□□ 1.29
PTPRA-207ENST00000431048 ZIC2O95409 532 aaPredicted RBP23.12■■□□□ 1.29
PTPRA-207ENST00000431048 HMBSP08397 361 aa23.12■■□□□ 1.29
PTPRA-207ENST00000431048 MPPE1Q53F39 396 aa23.12■■□□□ 1.29
PTPRA-207ENST00000431048 CACUL1Q86Y37 369 aa23.12■■□□□ 1.29
PTPRA-207ENST00000431048 WFIKKN2Q8TEU8 576 aa23.12■■□□□ 1.29
PTPRA-207ENST00000431048 SLC39A7Q92504 469 aa23.12■■□□□ 1.29
PTPRA-207ENST00000431048 ORAI3Q9BRQ5 295 aa23.12■■□□□ 1.29
PTPRA-207ENST00000431048 DNAI2Q9GZS0 605 aa23.12■■□□□ 1.29
PTPRA-207ENST00000431048 PRORYQ9H606 182 aa23.12■■□□□ 1.29
PTPRA-207ENST00000431048 UPF2Q9HAU5 1272 aaKnown RBP23.12■■□□□ 1.29
PTPRA-207ENST00000431048 MARCH2Q9P0N8 246 aa23.12■■□□□ 1.29
PTPRA-207ENST00000431048 FTSJ1Q9UET6 329 aa23.12■■□□□ 1.29
PTPRA-207ENST00000431048 PLA2G4CQ9UP65 541 aa23.12■■□□□ 1.29
PTPRA-207ENST00000431048 ATXN7O15265 892 aaPredicted RBP23.11■■□□□ 1.29
PTPRA-207ENST00000431048 CUTAO60888 179 aa23.11■■□□□ 1.29
PTPRA-207ENST00000431048 HLA-DRAP01903 254 aa23.11■■□□□ 1.29
PTPRA-207ENST00000431048 C1SP09871 688 aa23.11■■□□□ 1.29
PTPRA-207ENST00000431048 CASP1P29466 404 aa23.11■■□□□ 1.29
PTPRA-207ENST00000431048 RPS14P62263 151 aaKnown RBP23.11■■□□□ 1.29
PTPRA-207ENST00000431048 KCNT1Q5JUK3 1230 aa23.11■■□□□ 1.29
PTPRA-207ENST00000431048 SHC4Q6S5L8 630 aa23.11■■□□□ 1.29
PTPRA-207ENST00000431048 KIAA0907Q7Z7F0 614 aaPredicted RBP23.11■■□□□ 1.29
PTPRA-207ENST00000431048 PLD4Q96BZ4 506 aa23.11■■□□□ 1.29
PTPRA-207ENST00000431048 NXPE2Q96DL1 559 aa23.11■■□□□ 1.29
PTPRA-207ENST00000431048 BLZF1Q9H2G9 400 aa23.11■■□□□ 1.29
PTPRA-207ENST00000431048 A0A1B0GTQ1 180 aa23.1■■□□□ 1.29
PTPRA-207ENST00000431048 SLC12A8A0AV02 714 aa23.1■■□□□ 1.29
PTPRA-207ENST00000431048 PLK4O00444 970 aa23.1■■□□□ 1.29
PTPRA-207ENST00000431048 VILLO15195 856 aa23.1■■□□□ 1.29
PTPRA-207ENST00000431048 HOXD9P28356 352 aaPredicted RBP23.1■■□□□ 1.29
PTPRA-207ENST00000431048 EIF2S3P41091 472 aaKnown RBP23.1■■□□□ 1.29
PTPRA-207ENST00000431048 BCAT1P54687 386 aa23.1■■□□□ 1.29
PTPRA-207ENST00000431048 ZNF445P59923 1031 aa23.1■■□□□ 1.29
PTPRA-207ENST00000431048 TRIP4Q15650 581 aaPredicted RBP23.1■■□□□ 1.29
PTPRA-207ENST00000431048 C1orf220Q5T0J3 134 aa23.1■■□□□ 1.29
PTPRA-207ENST00000431048 PPP1R26Q5T8A7 1209 aaPredicted RBP23.1■■□□□ 1.29
PTPRA-207ENST00000431048 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.1■■□□□ 1.29
PTPRA-207ENST00000431048 PIP4K2CQ8TBX8 421 aa23.1■■□□□ 1.29
PTPRA-207ENST00000431048 GOLGA1Q92805 767 aa23.1■■□□□ 1.29
PTPRA-207ENST00000431048 DCBLD2Q96PD2 775 aa23.1■■□□□ 1.29
PTPRA-207ENST00000431048 PRSS16Q9NQE7 514 aa23.1■■□□□ 1.29
PTPRA-207ENST00000431048 C1QL1O75973 258 aa23.09■■□□□ 1.29
PTPRA-207ENST00000431048 FSBPO95073 299 aa23.09■■□□□ 1.29
PTPRA-207ENST00000431048 DNTTP04053 509 aa23.09■■□□□ 1.29
PTPRA-207ENST00000431048 HLA-FP30511 346 aa23.09■■□□□ 1.29
PTPRA-207ENST00000431048 PIK3CAP42336 1068 aa23.09■■□□□ 1.29
PTPRA-207ENST00000431048 RACK1P63244 317 aaKnown RBP23.09■■□□□ 1.29
PTPRA-207ENST00000431048 FNDC3BQ53EP0 1204 aaKnown RBP23.09■■□□□ 1.29
PTPRA-207ENST00000431048 CCDC157Q569K6 752 aa23.09■■□□□ 1.29
PTPRA-207ENST00000431048 RAB41Q5JT25 222 aa23.09■■□□□ 1.29
PTPRA-207ENST00000431048 KCTD10Q9H3F6 313 aa23.09■■□□□ 1.29
PTPRA-207ENST00000431048 APOBEC3GQ9HC16 384 aaKnown RBP23.09■■□□□ 1.29
PTPRA-207ENST00000431048 STOML2Q9UJZ1 356 aa23.09■■□□□ 1.29
PTPRA-207ENST00000431048 SHROOM3Q8TF72 1996 aa23.09■■□□□ 1.29
PTPRA-207ENST00000431048 PDXKO00764 312 aa23.08■■□□□ 1.29
PTPRA-207ENST00000431048 POLR2DO15514 142 aaKnown RBP23.08■■□□□ 1.29
PTPRA-207ENST00000431048 KIF20AO95235 890 aa23.08■■□□□ 1.29
PTPRA-207ENST00000431048 PRB1P04280 392 aa23.08■■□□□ 1.29
PTPRA-207ENST00000431048 JUPP14923 745 aa23.08■■□□□ 1.29
PTPRA-207ENST00000431048 ITPKBP27987 946 aa23.08■■□□□ 1.29
PTPRA-207ENST00000431048 HNF1BP35680 557 aa23.08■■□□□ 1.29
PTPRA-207ENST00000431048 CUL4BQ13620 913 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms