RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 GPR161Q8N6U8 529 aaKnown RBP17.69■□□□□ 0.42
UBE3D-204ENST00000430071 ZNF513Q8N8E2 541 aaPredicted RBP17.69■□□□□ 0.42
UBE3D-204ENST00000430071 KCTD13Q8WZ19 329 aa17.69■□□□□ 0.42
UBE3D-204ENST00000430071 SPAG5Q96R06 1193 aa17.69■□□□□ 0.42
UBE3D-204ENST00000430071 FBXO10Q9UK96 956 aa17.69■□□□□ 0.42
UBE3D-204ENST00000430071 WASH3PC4AMC7 463 aa17.68■□□□□ 0.42
UBE3D-204ENST00000430071 MSI1O43347 362 aaKnown RBP17.68■□□□□ 0.42
UBE3D-204ENST00000430071 THAP12O43422 761 aa17.68■□□□□ 0.42
UBE3D-204ENST00000430071 SETSIPP0DME0 302 aa17.68■□□□□ 0.42
UBE3D-204ENST00000430071 STAT1P42224 750 aa17.68■□□□□ 0.42
UBE3D-204ENST00000430071 SLC8A3P57103 927 aa17.68■□□□□ 0.42
UBE3D-204ENST00000430071 COG7P83436 770 aa17.68■□□□□ 0.42
UBE3D-204ENST00000430071 PUM1Q14671 1186 aaKnown RBP eCLIP17.68■□□□□ 0.42
UBE3D-204ENST00000430071 CSRP2Q16527 193 aa17.68■□□□□ 0.42
UBE3D-204ENST00000430071 FIGNQ5HY92 759 aa17.68■□□□□ 0.42
UBE3D-204ENST00000430071 FYB2Q5VWT5 728 aa17.68■□□□□ 0.42
UBE3D-204ENST00000430071 TCEAL6Q6IPX3 200 aa17.68■□□□□ 0.42
UBE3D-204ENST00000430071 FMNL3Q8IVF7 1028 aa17.68■□□□□ 0.42
UBE3D-204ENST00000430071 OLIG1Q8TAK6 271 aa17.68■□□□□ 0.42
UBE3D-204ENST00000430071 HMGB4Q8WW32 186 aa17.68■□□□□ 0.42
UBE3D-204ENST00000430071 ZNF606Q8WXB4 792 aa17.68■□□□□ 0.42
UBE3D-204ENST00000430071 TCEAL3Q969E4 200 aa17.68■□□□□ 0.42
UBE3D-204ENST00000430071 TRIM5Q9C035 493 aa17.68■□□□□ 0.42
UBE3D-204ENST00000430071 WDR35Q9P2L0 1181 aa17.68■□□□□ 0.42
UBE3D-204ENST00000430071 ITIH6Q6UXX5 1313 aa17.68■□□□□ 0.42
UBE3D-204ENST00000430071 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.67■□□□□ 0.42
UBE3D-204ENST00000430071 DCDC2BA2VCK2 349 aa17.67■□□□□ 0.42
UBE3D-204ENST00000430071 LRP3O75074 770 aa17.67■□□□□ 0.42
UBE3D-204ENST00000430071 GBP1P32455 592 aa17.67■□□□□ 0.42
UBE3D-204ENST00000430071 LMNB2Q03252 620 aa17.67■□□□□ 0.42
UBE3D-204ENST00000430071 PTK2Q05397 1052 aa17.67■□□□□ 0.42
UBE3D-204ENST00000430071 STILQ15468 1287 aa17.67■□□□□ 0.42
UBE3D-204ENST00000430071 TRIP4Q15650 581 aaPredicted RBP17.67■□□□□ 0.42
UBE3D-204ENST00000430071 KIAA1211LQ6NV74 962 aa17.67■□□□□ 0.42
UBE3D-204ENST00000430071 DENND1BQ6P3S1 775 aa17.67■□□□□ 0.42
UBE3D-204ENST00000430071 DGLUCYQ7Z3D6 616 aa17.67■□□□□ 0.42
UBE3D-204ENST00000430071 TADA2BQ86TJ2 420 aa17.67■□□□□ 0.42
UBE3D-204ENST00000430071 VSTM4Q8IW00 320 aa17.67■□□□□ 0.42
UBE3D-204ENST00000430071 ARHGAP18Q8N392 663 aa17.67■□□□□ 0.42
UBE3D-204ENST00000430071 CCDC26Q8TAB7 109 aa17.67■□□□□ 0.42
UBE3D-204ENST00000430071 XPO6Q96QU8 1125 aaKnown RBP17.67■□□□□ 0.42
UBE3D-204ENST00000430071 EDEM3Q9BZQ6 932 aa17.67■□□□□ 0.42
UBE3D-204ENST00000430071 SLC6A17Q9H1V8 727 aa17.67■□□□□ 0.42
UBE3D-204ENST00000430071 CD248Q9HCU0 757 aa17.67■□□□□ 0.42
UBE3D-204ENST00000430071 CYTH4Q9UIA0 394 aa17.67■□□□□ 0.42
UBE3D-204ENST00000430071 MBD1Q9UIS9 605 aaPredicted RBP17.67■□□□□ 0.42
UBE3D-204ENST00000430071 TPRP12270 2363 aaKnown RBP17.67■□□□□ 0.42
UBE3D-204ENST00000430071 A0A1W2PQF6 199 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 TCRBV21S2A2A0A5A6 115 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 PCNX2A6NKB5 2137 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 TSPAN3O60637 253 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 PENKP01210 267 aaPredicted RBP17.66■□□□□ 0.42
UBE3D-204ENST00000430071 GYPCP04921 128 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 CYP11B1P15538 503 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 DGKGP49619 791 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 ZNF75DP51815 510 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 BPIFB4P59827 614 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 GEN1Q17RS7 908 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 EOGTQ5NDL2 527 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 PLA2G2CQ5R387 149 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 E4F1Q66K89 784 aaPredicted RBP17.66■□□□□ 0.42
UBE3D-204ENST00000430071 SPECC1LQ69YQ0 1117 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 NOP9Q86U38 636 aaKnown RBP17.66■□□□□ 0.42
UBE3D-204ENST00000430071 SIX6OS1Q8N1H7 587 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 EPS8L1Q8TE68 723 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 DDX1Q92499 740 aaKnown RBP17.66■□□□□ 0.42
UBE3D-204ENST00000430071 CDK5RAP1Q96SZ6 601 aaKnown RBP17.66■□□□□ 0.42
UBE3D-204ENST00000430071 NUP58Q9BVL2 599 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 MIS12Q9H081 205 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 CD93Q9NPY3 652 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 TJP2Q9UDY2 1190 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 STARD13Q9Y3M8 1113 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 RAD54BQ9Y620 910 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 MUC22E2RYF6 1773 aaPredicted RBP17.66■□□□□ 0.42
UBE3D-204ENST00000430071 CACNA1EQ15878 2313 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 A0A1W2PQJ5 194 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 LRRC53A6NM62 1247 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 MED7O43513 233 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 FYNP06241 537 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 ZNF806P0C7X5 589 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 GABRG2P18507 467 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 MPLP40238 635 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 P2RY2P41231 377 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 GPD2P43304 727 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 SGSHP51688 502 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 ARID5AQ03989 594 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 MAP7D1Q3KQU3 841 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 USP39Q53GS9 565 aaKnown RBP17.66■□□□□ 0.42
UBE3D-204ENST00000430071 PMS2CLQ68D20 193 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 ERMP1Q7Z2K6 904 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 FAM217AQ8IXS0 508 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 SLC20A1Q8WUM9 679 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 CPLX3Q8WVH0 158 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 LOXL4Q96JB6 756 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 DCLK3Q9C098 648 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 CNGB3Q9NQW8 809 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 CACNA2D2Q9NY47 1150 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 NOCTQ9UK39 431 aaKnown RBP17.66■□□□□ 0.42
UBE3D-204ENST00000430071 CDV3Q9UKY7 258 aaKnown RBP17.66■□□□□ 0.42
UBE3D-204ENST00000430071 STRIP2Q9ULQ0 834 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms