RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	PCDHB4	Q9Y5E5	795 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	CEP192	Q8TEP8	1941 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	SPAAR	A0A1B0GVQ0	90 aa		18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738	YJEFN3	A6XGL0	299 aa		18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738		E7ENQ6	273 aa		18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738	AFP	P02771	609 aa	Known RBP	18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738	HMBS	P08397	361 aa		18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738	HOXB2	P14652	356 aa		18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738	ITPKA	P23677	461 aa		18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738	DAOA	P59103	153 aa		18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738	SIM1	P81133	766 aa	Predicted RBP	18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738	STIL	Q15468	1287 aa		18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738	PEAR1	Q5VY43	1037 aa	Predicted RBP	18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738	BSPRY	Q5W0U4	402 aa		18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738	PMF1	Q6P1K2	205 aa		18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738	CEP76	Q8TAP6	659 aa		18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738	KREMEN1	Q96MU8	473 aa		18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738	IPO9	Q96P70	1041 aa	Known RBP	18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738	ACOX2	Q99424	681 aa		18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738	CNTN6	Q9UQ52	1028 aa		18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738	WDFY3	Q8IZQ1	3526 aa		18.54	■□□□□ 0.56
MRPL28-203	ENST00000429738	GABRG2	P18507	467 aa		18.53	■□□□□ 0.56
MRPL28-203	ENST00000429738	RDX	P35241	583 aa	Known RBP	18.53	■□□□□ 0.56
MRPL28-203	ENST00000429738	ATXN3	P54252	364 aa	Predicted RBP	18.53	■□□□□ 0.56
MRPL28-203	ENST00000429738	DUOXA1	Q1HG43	343 aa		18.53	■□□□□ 0.56
MRPL28-203	ENST00000429738	RRAGA	Q7L523	313 aa		18.53	■□□□□ 0.56
MRPL28-203	ENST00000429738	DENND1C	Q8IV53	801 aa		18.53	■□□□□ 0.56
MRPL28-203	ENST00000429738	SIX6OS1	Q8N1H7	587 aa		18.53	■□□□□ 0.56
MRPL28-203	ENST00000429738	HDDC3	Q8N4P3	179 aa		18.53	■□□□□ 0.56
MRPL28-203	ENST00000429738	RBBP8NL	Q8NC74	664 aa	Predicted RBP	18.53	■□□□□ 0.56
MRPL28-203	ENST00000429738	BHMT	Q93088	406 aa		18.53	■□□□□ 0.56
MRPL28-203	ENST00000429738	MED15	Q96RN5	788 aa		18.53	■□□□□ 0.56
MRPL28-203	ENST00000429738	ABCC13	Q9NSE7	274 aa		18.53	■□□□□ 0.56
MRPL28-203	ENST00000429738	STOML2	Q9UJZ1	356 aa		18.53	■□□□□ 0.56
MRPL28-203	ENST00000429738	KLK13	Q9UKR3	277 aa		18.53	■□□□□ 0.56
MRPL28-203	ENST00000429738	HBS1L	Q9Y450	684 aa	Known RBP	18.53	■□□□□ 0.56
MRPL28-203	ENST00000429738	FAM221B	A6H8Z2	402 aa		18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738		H0Y626	953 aa		18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738	GFRA2	O00451	464 aa		18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738	AP5Z1	O43299	807 aa		18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738	TRIM16	O95361	564 aa		18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738	CFI	P05156	583 aa		18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738	BRD2	P25440	801 aa	Known RBP	18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738	MFAP3	P55082	362 aa		18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738	GFPT1	Q06210	699 aa	Predicted RBP	18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738	RING1	Q06587	406 aa		18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738	ACAP1	Q15027	740 aa		18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738	SLC36A4	Q6YBV0	504 aa		18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738	FMNL3	Q8IVF7	1028 aa		18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738	CHPF	Q8IZ52	775 aa		18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738	IRGQ	Q8WZA9	623 aa		18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738	HSFY1	Q96LI6	401 aa		18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738	SFMBT1	Q9UHJ3	866 aa		18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738	RWDD2A	Q9UIY3	292 aa		18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738	LHX6	Q9UPM6	363 aa		18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738	ADAMTS9	Q9P2N4	1935 aa		18.52	■□□□□ 0.56
MRPL28-203	ENST00000429738	ATXN2	Q99700	1313 aa	Known RBP	18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738		M0QYV0	167 aa		18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	FGFR1OP	O95684	399 aa	Known RBP	18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	CALCA	P01258	141 aa		18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	SERPINF2	P08697	491 aa		18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	LCP1	P13796	627 aa		18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	WAS	P42768	502 aa		18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	RPL34	P49207	117 aa	Known RBP	18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	RGS7	P49802	495 aa		18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	RPL6	Q02878	288 aa	Known RBP	18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	ENPP2	Q13822	863 aa		18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	CAMK4	Q16566	473 aa		18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	GEN1	Q17RS7	908 aa		18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	MSANTD2	Q6P1R3	559 aa		18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	IPO4	Q8TEX9	1081 aa	Known RBP	18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	EDEM1	Q92611	657 aa		18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	PIWIL1	Q96J94	861 aa	Known RBP	18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	GTPBP2	Q9BX10	602 aa	Known RBP	18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	INTS2	Q9H0H0	1204 aa	Known RBP	18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	CAPN10	Q9HC96	672 aa		18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	CHMP5	Q9NZZ3	219 aa		18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	CLEC4E	Q9ULY5	219 aa		18.51	■□□□□ 0.55
MRPL28-203	ENST00000429738	CKAP5	Q14008	2032 aa		18.5	■□□□□ 0.55
MRPL28-203	ENST00000429738	OPHN1	O60890	802 aa		18.5	■□□□□ 0.55
MRPL28-203	ENST00000429738	LATS1	O95835	1130 aa		18.5	■□□□□ 0.55
MRPL28-203	ENST00000429738	SDE2	Q6IQ49	451 aa		18.5	■□□□□ 0.55
MRPL28-203	ENST00000429738	RABEPK	Q7Z6M1	372 aa		18.5	■□□□□ 0.55
MRPL28-203	ENST00000429738	DEFB119	Q8N690	84 aa		18.5	■□□□□ 0.55
MRPL28-203	ENST00000429738	RNF139	Q8WU17	664 aa		18.5	■□□□□ 0.55
MRPL28-203	ENST00000429738	FSCN3	Q9NQT6	498 aa		18.5	■□□□□ 0.55
MRPL28-203	ENST00000429738	CACNA2D2	Q9NY47	1150 aa		18.5	■□□□□ 0.55
MRPL28-203	ENST00000429738	CALCOCO1	Q9P1Z2	691 aa		18.5	■□□□□ 0.55
MRPL28-203	ENST00000429738	THAP10	Q9P2Z0	257 aa	Predicted RBP	18.5	■□□□□ 0.55
MRPL28-203	ENST00000429738	NPC1	O15118	1278 aa		18.49	■□□□□ 0.55
MRPL28-203	ENST00000429738	IGLV3-27	P01718	113 aa		18.49	■□□□□ 0.55
MRPL28-203	ENST00000429738	CYBB	P04839	570 aa		18.49	■□□□□ 0.55
MRPL28-203	ENST00000429738	NDUFV2	P19404	249 aa		18.49	■□□□□ 0.55
MRPL28-203	ENST00000429738	GPD2	P43304	727 aa		18.49	■□□□□ 0.55
MRPL28-203	ENST00000429738	HARS2	P49590	506 aa	Known RBP	18.49	■□□□□ 0.55
MRPL28-203	ENST00000429738	ZNF445	P59923	1031 aa		18.49	■□□□□ 0.55
MRPL28-203	ENST00000429738	ZNF33A	Q06730	810 aa		18.49	■□□□□ 0.55
MRPL28-203	ENST00000429738	HNRNPD	Q14103	355 aa	Known RBP	18.49	■□□□□ 0.55
MRPL28-203	ENST00000429738	MEA1	Q16626	185 aa		18.49	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms