RNA–Protein interactions for RNA: ENST00000428634.1

PEX11B-202, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2

Gene PEX11B, Length 667 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-202ENST00000428634 AZIN2Q96A70 460 aa12.55□□□□□ -0.4
PEX11B-202ENST00000428634 HES6Q96HZ4 224 aa12.55□□□□□ -0.4
PEX11B-202ENST00000428634 BTN2A3PQ96KV6 586 aa12.55□□□□□ -0.4
PEX11B-202ENST00000428634 HAPLN3Q96S86 360 aa12.55□□□□□ -0.4
PEX11B-202ENST00000428634 SNRNP25Q9BV90 132 aaKnown RBP12.55□□□□□ -0.4
PEX11B-202ENST00000428634 RAB6CQ9H0N0 254 aa12.55□□□□□ -0.4
PEX11B-202ENST00000428634 TDP1Q9NUW8 608 aa12.55□□□□□ -0.4
PEX11B-202ENST00000428634 DNAI1Q9UI46 699 aa12.55□□□□□ -0.4
PEX11B-202ENST00000428634 PACSIN2Q9UNF0 486 aaPredicted RBP12.55□□□□□ -0.4
PEX11B-202ENST00000428634 AP4E1Q9UPM8 1137 aa12.55□□□□□ -0.4
PEX11B-202ENST00000428634 USP15Q9Y4E8 981 aaPredicted RBP12.55□□□□□ -0.4
PEX11B-202ENST00000428634 PCDHA3Q9Y5H8 950 aa12.55□□□□□ -0.4
PEX11B-202ENST00000428634 KCNU1A8MYU2 1149 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 LEFTY2O00292 366 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 NRG2O14511 850 aaPredicted RBP12.54□□□□□ -0.4
PEX11B-202ENST00000428634 STC2O76061 302 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 ZRANB2O95218 330 aaKnown RBP eCLIP12.54□□□□□ -0.4
PEX11B-202ENST00000428634 KRT1P04264 644 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 RARAP10276 462 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 TCF4P15884 667 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 TCF3P15923 654 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 CORO1AP31146 461 aaKnown RBP12.54□□□□□ -0.4
PEX11B-202ENST00000428634 DNA2P51530 1060 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 KCNQ1P51787 676 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 PDK2Q15119 407 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 SMTNL2Q2TAL5 461 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 PUS10Q3MIT2 529 aaKnown RBP12.54□□□□□ -0.4
PEX11B-202ENST00000428634 KCNT1Q5JUK3 1230 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 OTOP3Q7RTS5 596 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 ARID3BQ8IVW6 561 aaPredicted RBP12.54□□□□□ -0.4
PEX11B-202ENST00000428634 KATNAL2Q8IYT4 538 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 RCOR2Q8IZ40 523 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 CELF5Q8N6W0 485 aaKnown RBP12.54□□□□□ -0.4
PEX11B-202ENST00000428634 CCDC185Q8N715 623 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 SH3RF2Q8TEC5 729 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 SMARCD2Q92925 531 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 USP13Q92995 863 aaPredicted RBP12.54□□□□□ -0.4
PEX11B-202ENST00000428634 E2F7Q96AV8 911 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 ACSF2Q96CM8 615 aaPredicted RBP12.54□□□□□ -0.4
PEX11B-202ENST00000428634 RBM41Q96IZ5 413 aaKnown RBP12.54□□□□□ -0.4
PEX11B-202ENST00000428634 ZFRQ96KR1 1074 aaKnown RBP12.54□□□□□ -0.4
PEX11B-202ENST00000428634 ASB16Q96NS5 453 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 WDR24Q96S15 920 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 PEBP4Q96S96 227 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 POMKQ9H5K3 350 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 DHX35Q9H5Z1 703 aaKnown RBP12.54□□□□□ -0.4
PEX11B-202ENST00000428634 GKN1Q9NS71 199 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 CFAP97Q9P2B7 532 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 CDH22Q9UJ99 828 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 FAM50BQ9Y247 325 aa12.54□□□□□ -0.4
PEX11B-202ENST00000428634 E2F8A0AVK6 867 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 LRRD1A4D1F6 860 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 KCNK3O14649 394 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 ENC1O14682 589 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 DDX3YO15523 660 aaKnown RBP12.53□□□□□ -0.4
PEX11B-202ENST00000428634 MBTPS2O43462 519 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 ACSL4O60488 711 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 PAGE1O75459 146 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 ATP1A1P05023 1023 aaKnown RBP12.53□□□□□ -0.4
PEX11B-202ENST00000428634 ARL4AP40617 200 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 CDH6P55285 790 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 SEL1L2Q5TEA6 688 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 LRRC31Q6UY01 552 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 HTR3DQ70Z44 454 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 DENND1CQ8IV53 801 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 KIAA1958Q8N8K9 716 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 TTC16Q8NEE8 873 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 EXD1Q8NHP7 514 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 MAFAQ8NHW3 353 aaPredicted RBP12.53□□□□□ -0.4
PEX11B-202ENST00000428634 KRT35Q92764 455 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 PBKQ96KB5 322 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 C1orf74Q96LT6 269 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 ZSWIM3Q96MP5 696 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 EPAS1Q99814 870 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 TLR10Q9BXR5 811 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 SIK2Q9H0K1 926 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 OSBPL2Q9H1P3 480 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.53□□□□□ -0.4
PEX11B-202ENST00000428634 GPATCH2LQ9NWQ4 482 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 OBP2AQ9NY56 170 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 TBC1D14Q9P2M4 693 aa12.53□□□□□ -0.4
PEX11B-202ENST00000428634 GRXCR2A6NFK2 248 aa12.52□□□□□ -0.41
PEX11B-202ENST00000428634 H3BRJ5 948 aa12.52□□□□□ -0.41
PEX11B-202ENST00000428634 SLC9A3R1O14745 358 aaPredicted RBP12.52□□□□□ -0.41
PEX11B-202ENST00000428634 TCP1P17987 556 aaKnown RBP12.52□□□□□ -0.41
PEX11B-202ENST00000428634 KDELR1P24390 212 aa12.52□□□□□ -0.41
PEX11B-202ENST00000428634 L1CAMP32004 1257 aa12.52□□□□□ -0.41
PEX11B-202ENST00000428634 HTR7P34969 479 aa12.52□□□□□ -0.41
PEX11B-202ENST00000428634 PEX5P50542 639 aa12.52□□□□□ -0.41
PEX11B-202ENST00000428634 MLLT6P55198 1093 aaPredicted RBP12.52□□□□□ -0.41
PEX11B-202ENST00000428634 COPS2P61201 443 aa12.52□□□□□ -0.41
PEX11B-202ENST00000428634 USP4Q13107 963 aa12.52□□□□□ -0.41
PEX11B-202ENST00000428634 DPYSL2Q16555 572 aa12.52□□□□□ -0.41
PEX11B-202ENST00000428634 LEXMQ3ZCV2 418 aa12.52□□□□□ -0.41
PEX11B-202ENST00000428634 ATP13A4Q4VNC1 1196 aa12.52□□□□□ -0.41
PEX11B-202ENST00000428634 FAM78AQ5JUQ0 283 aa12.52□□□□□ -0.41
PEX11B-202ENST00000428634 DNTTIP2Q5QJE6 756 aaKnown RBP12.52□□□□□ -0.41
PEX11B-202ENST00000428634 PAPD7Q5XG87 772 aaKnown RBP12.52□□□□□ -0.41
PEX11B-202ENST00000428634 TXNRD3NBQ6F5E7 133 aa12.52□□□□□ -0.41
PEX11B-202ENST00000428634 CYP4V2Q6ZWL3 525 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms