RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 SNX16P57768 344 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 DMC1Q14565 340 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 NR1I3Q14994 352 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 PREPLQ4J6C6 727 aaPredicted RBP17.36■□□□□ 0.37
VRK2-204ENST00000428021 FILIP1LQ4L180 1135 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 C2CD6Q53TS8 623 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 NAA35Q5VZE5 725 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 HEATR6Q6AI08 1181 aaKnown RBP17.36■□□□□ 0.37
VRK2-204ENST00000428021 NADSYN1Q6IA69 706 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 ERICH1Q86X53 443 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 XYLT1Q86Y38 959 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 ZDHHC17Q8IUH5 632 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 ALLCQ8N6M5 410 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 BAP1Q92560 729 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 ACDQ96AP0 544 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 C18orf8Q96DM3 657 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 PCDHB18PQ96TA0 734 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 SYNCQ9H7C4 482 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 ZDHHC4Q9NPG8 344 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 MMP17Q9ULZ9 603 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 SLC8A2Q9UPR5 921 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 SLC27A6Q9Y2P4 619 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 STARD13Q9Y3M8 1113 aa17.36■□□□□ 0.37
VRK2-204ENST00000428021 GPR179Q6PRD1 2367 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 GFRA3O60609 400 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 ADAM23O75077 832 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 DAB1O75553 588 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 CAVIN2O95810 425 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 CYBBP04839 570 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 HNRNPLP14866 589 aaKnown RBP eCLIP17.35■□□□□ 0.37
VRK2-204ENST00000428021 HOXD9P28356 352 aaPredicted RBP17.35■□□□□ 0.37
VRK2-204ENST00000428021 SLC6A4P31645 630 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 PXNP49023 591 aaPredicted RBP17.35■□□□□ 0.37
VRK2-204ENST00000428021 SLC11A2P49281 568 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 SGSHP51688 502 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 CDK17Q00537 523 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 MPPE1Q53F39 396 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 ZC3H12AQ5D1E8 599 aaKnown RBP17.35■□□□□ 0.37
VRK2-204ENST00000428021 C10orf76Q5T2E6 689 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 RNF43Q68DV7 783 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 RFWD3Q6PCD5 774 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 WDR5BQ86VZ2 330 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 LONP2Q86WA8 852 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 CAMKK1Q8N5S9 505 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 SUMF1Q8NBK3 374 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 TXNDC5Q8NBS9 432 aaKnown RBP17.35■□□□□ 0.37
VRK2-204ENST00000428021 DDI1Q8WTU0 396 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 TMA16Q96EY4 203 aaKnown RBP17.35■□□□□ 0.37
VRK2-204ENST00000428021 MYEOVQ96EZ4 313 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 HHIPQ96QV1 700 aa17.35■□□□□ 0.37
VRK2-204ENST00000428021 XPO7Q9UIA9 1087 aaKnown RBP17.35■□□□□ 0.37
VRK2-204ENST00000428021 A0A1W2PQC6 194 aa17.34■□□□□ 0.37
VRK2-204ENST00000428021 SGK1O00141 431 aa17.34■□□□□ 0.37
VRK2-204ENST00000428021 HRO43593 1189 aa17.34■□□□□ 0.37
VRK2-204ENST00000428021 KLF8O95600 359 aaPredicted RBP17.34■□□□□ 0.37
VRK2-204ENST00000428021 NOS2P35228 1153 aa17.34■□□□□ 0.37
VRK2-204ENST00000428021 SCNN1AP37088 669 aa17.34■□□□□ 0.37
VRK2-204ENST00000428021 ZNF445P59923 1031 aa17.34■□□□□ 0.37
VRK2-204ENST00000428021 FANCCQ00597 558 aa17.34■□□□□ 0.37
VRK2-204ENST00000428021 ARID5AQ03989 594 aa17.34■□□□□ 0.37
VRK2-204ENST00000428021 EML5Q05BV3 1969 aa17.34■□□□□ 0.37
VRK2-204ENST00000428021 HSF5Q4G112 596 aaPredicted RBP17.34■□□□□ 0.37
VRK2-204ENST00000428021 PIK3R6Q5UE93 754 aa17.34■□□□□ 0.37
VRK2-204ENST00000428021 OTUD1Q5VV17 481 aaPredicted RBP17.34■□□□□ 0.37
VRK2-204ENST00000428021 TMEM92Q6UXU6 159 aa17.34■□□□□ 0.37
VRK2-204ENST00000428021 CACNA2D4Q7Z3S7 1137 aa17.34■□□□□ 0.37
VRK2-204ENST00000428021 IRF2BP2Q7Z5L9 587 aa17.34■□□□□ 0.37
VRK2-204ENST00000428021 KCNV2Q8TDN2 545 aa17.34■□□□□ 0.37
VRK2-204ENST00000428021 ADAM33Q9BZ11 813 aa17.34■□□□□ 0.37
VRK2-204ENST00000428021 CALCOCO1Q9P1Z2 691 aa17.34■□□□□ 0.37
VRK2-204ENST00000428021 CCDC163A0A0D9SF12 145 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 KCNU1A8MYU2 1149 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 SERPINC1P01008 464 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 LMNAP02545 664 aaKnown RBP17.33■□□□□ 0.36
VRK2-204ENST00000428021 UNGP13051 313 aaPredicted RBP17.33■□□□□ 0.36
VRK2-204ENST00000428021 MMP8P22894 467 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 MATKP42679 507 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 SRSF5Q13243 272 aaKnown RBP17.33■□□□□ 0.36
VRK2-204ENST00000428021 CRY1Q16526 586 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 GEN1Q17RS7 908 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 EGFLAMQ63HQ2 1017 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 TRIM72Q6ZMU5 477 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 NUDT18Q6ZVK8 323 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 ZNF513Q8N8E2 541 aaPredicted RBP17.33■□□□□ 0.36
VRK2-204ENST00000428021 SLC30A5Q8TAD4 765 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 OLIG1Q8TAK6 271 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 NT5C3BQ969T7 300 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 PRICKLE1Q96MT3 831 aaPredicted RBP17.33■□□□□ 0.36
VRK2-204ENST00000428021 ACOX2Q99424 681 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 NPY6RQ99463 290 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 SLC2A11Q9BYW1 496 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 IRX2Q9BZI1 471 aaPredicted RBP17.33■□□□□ 0.36
VRK2-204ENST00000428021 TTYH3Q9C0H2 523 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 NUCKS1Q9H1E3 243 aaKnown RBP17.33■□□□□ 0.36
VRK2-204ENST00000428021 EPC1Q9H2F5 836 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 FAM204AQ9H8W3 233 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 DDIT4Q9NX09 232 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 MYO6Q9UM54 1294 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 OTOGLQ3ZCN5 2332 aa17.33■□□□□ 0.36
VRK2-204ENST00000428021 FAM186AA6NE01 2351 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms