RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 ZNF333Q96JL9 665 aa14.76□□□□□ -0.05
LIG1-202ENST00000427526 MRPL45Q9BRJ2 306 aaKnown RBP14.76□□□□□ -0.05
LIG1-202ENST00000427526 B3GNT5Q9BYG0 378 aa14.76□□□□□ -0.05
LIG1-202ENST00000427526 MOCS1Q9NZB8 636 aa14.76□□□□□ -0.05
LIG1-202ENST00000427526 DOCK3Q8IZD9 2030 aa14.76□□□□□ -0.05
LIG1-202ENST00000427526 A6NJR5 290 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 SKAP2O75563 359 aaPredicted RBP14.75□□□□□ -0.05
LIG1-202ENST00000427526 SMIM10L2AP0DMW4 78 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 SMIM10L2BP0DMW5 78 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 TIFABQ6ZNK6 161 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 ACOT1Q86TX2 421 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 SESTD1Q86VW0 696 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 NUDCD3Q8IVD9 361 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 NRG4Q8WWG1 115 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 CENPIQ92674 756 aaPredicted RBP14.75□□□□□ -0.05
LIG1-202ENST00000427526 MAGEB5Q9BZ81 275 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 MTMR10Q9NXD2 777 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 HESX1Q9UBX0 185 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 PCDHA11Q9Y5I1 949 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 KAT6AQ92794 2004 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 KRT36O76013 467 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 BPGMP07738 259 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 ZNF865P0CJ78 1059 aaPredicted RBP14.75□□□□□ -0.05
LIG1-202ENST00000427526 SETSIPP0DME0 302 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 GRIA1P42261 906 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 RAP1GDS1P52306 607 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 RCN1Q15293 331 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 ARID3BQ8IVW6 561 aaPredicted RBP14.75□□□□□ -0.05
LIG1-202ENST00000427526 NDUFAF2Q8N183 169 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 MICAL1Q8TDZ2 1067 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 SPDL1Q96EA4 605 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 ADAMTS10Q9H324 1103 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 NMRK1Q9NWW6 199 aa14.75□□□□□ -0.05
LIG1-202ENST00000427526 BIRC5O15392 142 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 TOMM70O94826 608 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 PSMG1O95456 288 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 GSRP00390 522 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 NR2C2P49116 596 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 MROH9Q5TGP6 573 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 CAPRIN2Q6IMN6 1127 aaKnown RBP14.74□□□□□ -0.05
LIG1-202ENST00000427526 TLK2Q86UE8 772 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 ZDHHC17Q8IUH5 632 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 ADGRF2Q8IZF7 708 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 KIF12Q96FN5 646 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 RNF19AQ9NV58 838 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.74□□□□□ -0.05
LIG1-202ENST00000427526 MAD1L1Q9Y6D9 718 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 CENPFP49454 3210 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 MAGEC1O60732 1142 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 TBX10O75333 385 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 HOXA11P31270 313 aaPredicted RBP14.74□□□□□ -0.05
LIG1-202ENST00000427526 VHLP40337 213 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 PTPN9P43378 593 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 BEX3Q00994 111 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 SEMA5AQ13591 1074 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 SNX30Q5VWJ9 437 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 TMPRSS6Q8IU80 811 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 OSMRQ99650 979 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 OSBPL1AQ9BXW6 950 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 FAM49BQ9NUQ9 324 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 PCMTD2Q9NV79 361 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 NVLO15381 856 aaKnown RBP14.74□□□□□ -0.05
LIG1-202ENST00000427526 SERPINB9P50453 376 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 ATXN1P54253 815 aaKnown RBP14.74□□□□□ -0.05
LIG1-202ENST00000427526 SLC34A1Q06495 639 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 TSNAXIP1Q2TAA8 658 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 KCNT2Q6UVM3 1135 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 STKLD1Q8NE28 680 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 FBXO27Q8NI29 283 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 FAM136AQ96C01 138 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 QKIQ96PU8 341 aaKnown RBP eCLIP14.74□□□□□ -0.05
LIG1-202ENST00000427526 WWP1Q9H0M0 922 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 XAB2Q9HCS7 855 aaKnown RBP14.74□□□□□ -0.05
LIG1-202ENST00000427526 ZFATQ9P243 1243 aa14.74□□□□□ -0.05
LIG1-202ENST00000427526 STX18Q9P2W9 335 aaKnown RBP14.74□□□□□ -0.05
LIG1-202ENST00000427526 RRN3P2A6NIE6 340 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 A8MXQ7 604 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 B2RBV5 119 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 GPR32O75388 356 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 ALDH1A2O94788 518 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 NPTXRO95502 500 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 F2P00734 622 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 ZFXP17010 805 aaPredicted RBP14.73□□□□□ -0.05
LIG1-202ENST00000427526 PGM1P36871 562 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 ZNF410Q86VK4 478 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 CCDC106Q9BWC9 280 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 PLA2G4CQ9UP65 541 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 HES2Q9Y543 173 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 CCDC195A0A1B0GUA6 201 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 CAPN9O14815 690 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 PPEF2O14830 753 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 GRM5P41594 1212 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 AQP5P55064 265 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 STEAP4Q687X5 459 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 ARCQ7LC44 396 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 CRLF3Q8IUI8 442 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 SMC1BQ8NDV3 1235 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 CLEC4CQ8WTT0 213 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 CSPG4P5Q96PW8 444 aa14.73□□□□□ -0.05
LIG1-202ENST00000427526 EIF2AQ9BY44 585 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms