RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 FAM172AQ8WUF8 416 aa8.84□□□□□ -0.99
SH3D19-204ENST00000427414 OVCA2Q8WZ82 227 aa8.84□□□□□ -0.99
SH3D19-204ENST00000427414 ARHGEF2Q92974 986 aaKnown RBP8.84□□□□□ -0.99
SH3D19-204ENST00000427414 ETNK1Q9HBU6 452 aa8.84□□□□□ -0.99
SH3D19-204ENST00000427414 KRT82Q9NSB4 513 aa8.84□□□□□ -0.99
SH3D19-204ENST00000427414 ETAA1Q9NY74 926 aa8.84□□□□□ -0.99
SH3D19-204ENST00000427414 KLHL14Q9P2G3 628 aa8.84□□□□□ -0.99
SH3D19-204ENST00000427414 CPSF2Q9P2I0 782 aaKnown RBP8.84□□□□□ -0.99
SH3D19-204ENST00000427414 FZD10Q9ULW2 581 aa8.84□□□□□ -0.99
SH3D19-204ENST00000427414 TTC3P53804 2025 aa8.84□□□□□ -1
SH3D19-204ENST00000427414 LRRD1A4D1F6 860 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 NCAM2O15394 837 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 SMIM24O75264 130 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 DDHD2O94830 711 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 RTN3O95197 1032 aaPredicted RBP8.83□□□□□ -1
SH3D19-204ENST00000427414 GJB6O95452 261 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 ZBED1O96006 694 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 IVDP26440 423 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 IL1R2P27930 398 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 CCNG1P51959 295 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 HDAC4P56524 1084 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 DPYSL3Q14195 570 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 MORF4L2Q15014 288 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 ARL13BQ3SXY8 428 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 TRNP1Q6NT89 227 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 AADACL2Q6P093 401 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 LLGL2Q6P1M3 1020 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 MSANTD2Q6P1R3 559 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 SLC30A9Q6PML9 568 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 ZNF365Q70YC5 407 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 PDZD4Q76G19 769 aaPredicted RBP8.83□□□□□ -1
SH3D19-204ENST00000427414 SCUBE3Q8IX30 993 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 TEX9Q8N6V9 391 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 GDAP1Q8TB36 358 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 MYLPFQ96A32 169 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 CDK5RAP1Q96SZ6 601 aaKnown RBP8.83□□□□□ -1
SH3D19-204ENST00000427414 ROPN1BQ9BZX4 212 aaPredicted RBP8.83□□□□□ -1
SH3D19-204ENST00000427414 OSBPL2Q9H1P3 480 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 ROPN1Q9HAT0 212 aaPredicted RBP8.83□□□□□ -1
SH3D19-204ENST00000427414 ABCC13Q9NSE7 274 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 TJP2Q9UDY2 1190 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 CHORDC1Q9UHD1 332 aaPredicted RBP8.83□□□□□ -1
SH3D19-204ENST00000427414 SHOC2Q9UQ13 582 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 DPPA5A6NC42 116 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 TADA2AO75478 443 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 TCEA3O75764 348 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 IGLV3-25P01717 112 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 FESP07332 822 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 SSR1P43307 286 aaKnown RBP8.83□□□□□ -1
SH3D19-204ENST00000427414 MAGEA6P43360 314 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 TKTL1P51854 596 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 KRT17Q04695 432 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 ADIGQ0VDE8 80 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 ORC1Q13415 861 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 C2CD6Q53TS8 623 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 TNFAIP8L3Q5GJ75 292 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 SPATA2LQ8IUW3 424 aaPredicted RBP8.83□□□□□ -1
SH3D19-204ENST00000427414 CMTR2Q8IYT2 770 aaKnown RBP8.83□□□□□ -1
SH3D19-204ENST00000427414 ZMIZ2Q8NF64 920 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 FBF1Q8TES7 1133 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 RMDN2Q96LZ7 410 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 RAB3IPQ96QF0 476 aaPredicted RBP8.83□□□□□ -1
SH3D19-204ENST00000427414 TSC22D3Q99576 134 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 C11orf49Q9H6J7 331 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 NRDE2Q9H7Z3 1164 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 PCDH18Q9HCL0 1135 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 OLA1Q9NTK5 396 aaKnown RBP8.83□□□□□ -1
SH3D19-204ENST00000427414 NKX1-2Q9UD57 310 aaPredicted RBP8.83□□□□□ -1
SH3D19-204ENST00000427414 SCML2Q9UQR0 700 aa8.83□□□□□ -1
SH3D19-204ENST00000427414 MYBPHLA2RUH7 354 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 ANKRD33BA6NCL7 494 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 H3BRJ5 948 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 TNFRSF10BO14763 440 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 AHCYL1O43865 530 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 LTFP02788 710 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 CLTBP09497 229 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 ATF2P15336 505 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 L1CAMP32004 1257 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 SSTR3P32745 418 aaPredicted RBP8.82□□□□□ -1
SH3D19-204ENST00000427414 RGS7P49802 495 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 RNASELQ05823 741 aaKnown RBP8.82□□□□□ -1
SH3D19-204ENST00000427414 GPR17Q13304 367 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 RASA2Q15283 850 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 MFSD5Q6N075 450 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 RTL10Q7L3V2 364 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 TTC25Q96NG3 672 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 HAPLN3Q96S86 360 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 FERMT1Q9BQL6 677 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 FETUBQ9UGM5 382 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 SSX2IPQ9Y2D8 614 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 PCDHB5Q9Y5E4 795 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.82□□□□□ -1
SH3D19-204ENST00000427414 TCRBV7S2A1N4TA0A589 114 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 DNALI1O14645 258 aaPredicted RBP8.82□□□□□ -1
SH3D19-204ENST00000427414 APOL1O14791 398 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 MCF2LO15068 1137 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 MTSS1O43312 755 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 ACSL3O95573 720 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 TIMP1P01033 207 aa8.82□□□□□ -1
SH3D19-204ENST00000427414 PDHA1P08559 390 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms