RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 CCDC189A1A4V9 331 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 H0YIZ8 118 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 ADAMTS3O15072 1205 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 FIBPO43427 364 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 PDHA1P08559 390 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 CHRM3P20309 590 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 KCNJ4P48050 445 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 ZNF135P52742 658 aaPredicted RBP5.65□□□□□ -1.5
LINC00458-202ENST00000427299 AK2P54819 239 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 FHL1Q13642 323 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 FGL2Q14314 439 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 KIAA0753Q2KHM9 967 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 PLEKHO1Q53GL0 409 aaPredicted RBP5.65□□□□□ -1.5
LINC00458-202ENST00000427299 ZNF517Q6ZMY9 492 aaPredicted RBP5.65□□□□□ -1.5
LINC00458-202ENST00000427299 ZNF804AQ7Z570 1209 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 PPP1R32Q7Z5V6 425 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.65□□□□□ -1.5
LINC00458-202ENST00000427299 FANCBQ8NB91 859 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 MYRIPQ8NFW9 859 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 IP6K1Q92551 441 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 SLC35A4Q96G79 324 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 STRBPQ96SI9 672 aaKnown RBP5.65□□□□□ -1.5
LINC00458-202ENST00000427299 UPF3BQ9BZI7 483 aaKnown RBP5.65□□□□□ -1.5
LINC00458-202ENST00000427299 PRSS22Q9GZN4 317 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 USP44Q9H0E7 712 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 WDCPQ9H6R7 721 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 ZMAT3Q9HA38 289 aaKnown RBP5.65□□□□□ -1.5
LINC00458-202ENST00000427299 PDRG1Q9NUG6 133 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 HYPKQ9NX55 129 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 ELOVL5Q9NYP7 299 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 CFAP97Q9P2B7 532 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 ABCF2Q9UG63 623 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 TAGLN3Q9UI15 199 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 AGAP1Q9UPQ3 857 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 FAM50BQ9Y247 325 aa5.65□□□□□ -1.5
LINC00458-202ENST00000427299 C4AP0C0L4 1744 aa5.65□□□□□ -1.51
LINC00458-202ENST00000427299 C4BP0C0L5 1744 aa5.65□□□□□ -1.51
LINC00458-202ENST00000427299 LAMB2P55268 1798 aa5.65□□□□□ -1.51
LINC00458-202ENST00000427299 DCCP43146 1447 aa5.65□□□□□ -1.51
LINC00458-202ENST00000427299 WNK3Q9BYP7 1800 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 GOLGA6L4A6NEF3 574 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 SMIM22K7EJ46 135 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 SH3BP5O60239 455 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 SYT1P21579 422 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 GJB2P29033 226 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 TM4SF4P48230 202 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 NEK3P51956 506 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 EIF4A1P60842 406 aaKnown RBP5.64□□□□□ -1.51
LINC00458-202ENST00000427299 NEXNQ0ZGT2 675 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 BEND3Q5T5X7 828 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 EMC10Q5UCC4 262 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 ZNF530Q6P9A1 599 aaPredicted RBP5.64□□□□□ -1.51
LINC00458-202ENST00000427299 RUFY3Q7L099 469 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 SPICE1Q8N0Z3 855 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 LRTOMTQ8WZ04 291 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 MRGPRX1Q96LB2 322 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 JAKMIP1Q96N16 626 aaKnown RBP5.64□□□□□ -1.51
LINC00458-202ENST00000427299 SPRTNQ9H040 489 aaPredicted RBP5.64□□□□□ -1.51
LINC00458-202ENST00000427299 MAF1Q9H063 256 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 NUP62CLQ9H1M0 184 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 ALDH8A1Q9H2A2 487 aaPredicted RBP5.64□□□□□ -1.51
LINC00458-202ENST00000427299 MRPL46Q9H2W6 279 aaKnown RBP5.64□□□□□ -1.51
LINC00458-202ENST00000427299 IL1RAPL2Q9NP60 686 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 DLL3Q9NYJ7 618 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 C9orf78Q9NZ63 289 aaPredicted RBP5.64□□□□□ -1.51
LINC00458-202ENST00000427299 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.64□□□□□ -1.51
LINC00458-202ENST00000427299 DOCK2Q92608 1830 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 MYH13Q9UKX3 1938 aa5.64□□□□□ -1.51
LINC00458-202ENST00000427299 SHANK3Q9BYB0 1731 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 VPS37CA5D8V6 355 aaPredicted RBP5.63□□□□□ -1.51
LINC00458-202ENST00000427299 H3BUI4 141 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 PPM1DO15297 605 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 NEMFO60524 1076 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 NBPF7P0C2Y1 421 aaPredicted RBP5.63□□□□□ -1.51
LINC00458-202ENST00000427299 MYF5P13349 255 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 HTR3AP46098 478 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 ALDH5A1P51649 535 aaPredicted RBP5.63□□□□□ -1.51
LINC00458-202ENST00000427299 G3BP1Q13283 466 aaKnown RBP eCLIP5.63□□□□□ -1.51
LINC00458-202ENST00000427299 PICALMQ13492 652 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 POLD3Q15054 466 aaPredicted RBP5.63□□□□□ -1.51
LINC00458-202ENST00000427299 ZRSR2Q15696 482 aaKnown RBP5.63□□□□□ -1.51
LINC00458-202ENST00000427299 BLOC1S2Q6QNY1 142 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 CWC27Q6UX04 472 aaKnown RBP5.63□□□□□ -1.51
LINC00458-202ENST00000427299 MAVSQ7Z434 540 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 DTX2Q86UW9 622 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 PPP1R3BQ86XI6 285 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 CCDC83Q8IWF9 413 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 LINS1Q8NG48 757 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 IL31RAQ8NI17 732 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 APIPQ96GX9 242 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 FSD1Q9BTV5 496 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 ARMT1Q9H993 441 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 GNL3LQ9NVN8 582 aaKnown RBP5.63□□□□□ -1.51
LINC00458-202ENST00000427299 MIS18AQ9NYP9 233 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 PHTF1Q9UMS5 762 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 RAD54BQ9Y620 910 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 UTYO14607 1347 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 PALLDQ8WX93 1383 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 HEG1Q9ULI3 1381 aa5.63□□□□□ -1.51
LINC00458-202ENST00000427299 NPHP4O75161 1426 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms