RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 FAM72DQ6L9T8 149 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 PCGF5Q86SE9 256 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 FAM72BQ86X60 149 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 ZCCHC9Q8N567 271 aaKnown RBP15.73■□□□□ 0.11
ACTB-204ENST00000425660 UBLCP1Q8WVY7 318 aaPredicted RBP15.73■□□□□ 0.11
ACTB-204ENST00000425660 TMEM169Q96HH4 297 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 RUFY1Q96T51 708 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 OSBPL2Q9H1P3 480 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 ETNK2Q9NVF9 386 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 PLAAQ9Y263 795 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 SLC27A5Q9Y2P5 690 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 MRPL42Q9Y6G3 142 aaKnown RBP15.73■□□□□ 0.11
ACTB-204ENST00000425660 H7C0C1 242 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 EEF2KO00418 725 aaKnown RBP15.73■□□□□ 0.11
ACTB-204ENST00000425660 ACRP10323 421 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 YWHAQP27348 245 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 CHKAP35790 457 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 ATP5OP48047 213 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 PSEN1P49768 467 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 CBX1P83916 185 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 PPP2R5DQ14738 602 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 SLC45A4Q5BKX6 768 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 TRMT10CQ7L0Y3 403 aaKnown RBP15.73■□□□□ 0.11
ACTB-204ENST00000425660 C16orf59Q7L2K0 433 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 STKLD1Q8NE28 680 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 CASP10Q92851 521 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 SERPINB11Q96P15 392 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 HAPLN3Q96S86 360 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 SEPT5Q99719 369 aaPredicted RBP15.73■□□□□ 0.11
ACTB-204ENST00000425660 CLSTN3Q9BQT9 956 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 HERC2P3Q9BVR0 1158 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 SEMA4AQ9H3S1 761 aa15.73■□□□□ 0.11
ACTB-204ENST00000425660 HACD1B0YJ81 288 aa15.72■□□□□ 0.11
ACTB-204ENST00000425660 SMAPO00193 183 aa15.72■□□□□ 0.11
ACTB-204ENST00000425660 CREB3O43889 395 aa15.72■□□□□ 0.11
ACTB-204ENST00000425660 SOAT2O75908 522 aa15.72■□□□□ 0.11
ACTB-204ENST00000425660 ABLIM3O94929 683 aa15.72■□□□□ 0.11
ACTB-204ENST00000425660 ATF6P18850 670 aa15.72■□□□□ 0.11
ACTB-204ENST00000425660 CCR1P32246 355 aa15.72■□□□□ 0.11
ACTB-204ENST00000425660 OR1D2P34982 312 aa15.72■□□□□ 0.11
ACTB-204ENST00000425660 SPOUT1Q5T280 376 aaKnown RBP15.72■□□□□ 0.11
ACTB-204ENST00000425660 KIAA1841Q6NSI8 718 aa15.72■□□□□ 0.11
ACTB-204ENST00000425660 CEP128Q6ZU80 1094 aa15.72■□□□□ 0.11
ACTB-204ENST00000425660 DDX53Q86TM3 631 aaKnown RBP15.72■□□□□ 0.11
ACTB-204ENST00000425660 HOOK3Q86VS8 718 aa15.72■□□□□ 0.11
ACTB-204ENST00000425660 CDKL3Q8IVW4 592 aaPredicted RBP15.72■□□□□ 0.11
ACTB-204ENST00000425660 GPR65Q8IYL9 337 aa15.72■□□□□ 0.11
ACTB-204ENST00000425660 COLGALT1Q8NBJ5 622 aa15.72■□□□□ 0.11
ACTB-204ENST00000425660 ZNF461Q8TAF7 563 aa15.72■□□□□ 0.11
ACTB-204ENST00000425660 QKIQ96PU8 341 aaKnown RBP eCLIP15.72■□□□□ 0.11
ACTB-204ENST00000425660 TTLL2Q9BWV7 592 aa15.72■□□□□ 0.11
ACTB-204ENST00000425660 PHACTR1Q9C0D0 580 aa15.72■□□□□ 0.11
ACTB-204ENST00000425660 SPG21Q9NZD8 308 aa15.72■□□□□ 0.11
ACTB-204ENST00000425660 GMIPQ9P107 970 aa15.72■□□□□ 0.11
ACTB-204ENST00000425660 OR12D3Q9UGF7 316 aa15.72■□□□□ 0.11
ACTB-204ENST00000425660 AFF4Q9UHB7 1163 aaKnown RBP15.72■□□□□ 0.11
ACTB-204ENST00000425660 ZDHHC11BP0C7U3 371 aa15.71■□□□□ 0.11
ACTB-204ENST00000425660 RBL1P28749 1068 aa15.71■□□□□ 0.11
ACTB-204ENST00000425660 TUFMP49411 452 aaKnown RBP15.71■□□□□ 0.11
ACTB-204ENST00000425660 GLUD2P49448 558 aa15.71■□□□□ 0.11
ACTB-204ENST00000425660 EIF3BP55884 814 aaKnown RBP15.71■□□□□ 0.11
ACTB-204ENST00000425660 FAM193AP78312 1265 aa15.71■□□□□ 0.11
ACTB-204ENST00000425660 TPGS2Q68CL5 300 aa15.71■□□□□ 0.11
ACTB-204ENST00000425660 FAM117BQ6P1L5 589 aa15.71■□□□□ 0.11
ACTB-204ENST00000425660 OTOP2Q7RTS6 562 aa15.71■□□□□ 0.11
ACTB-204ENST00000425660 PPIL6Q8IXY8 311 aa15.71■□□□□ 0.11
ACTB-204ENST00000425660 NAT8LQ8N9F0 302 aa15.71■□□□□ 0.11
ACTB-204ENST00000425660 GPR152Q8TDT2 470 aa15.71■□□□□ 0.11
ACTB-204ENST00000425660 CPT1BQ92523 772 aa15.71■□□□□ 0.11
ACTB-204ENST00000425660 PRCCQ92733 491 aaPredicted RBP15.71■□□□□ 0.11
ACTB-204ENST00000425660 EPAS1Q99814 870 aa15.71■□□□□ 0.11
ACTB-204ENST00000425660 SFMBT1Q9UHJ3 866 aa15.71■□□□□ 0.11
ACTB-204ENST00000425660 TLR6Q9Y2C9 796 aa15.71■□□□□ 0.11
ACTB-204ENST00000425660 MFHAS1Q9Y4C4 1052 aa15.71■□□□□ 0.11
ACTB-204ENST00000425660 RAD54BQ9Y620 910 aa15.71■□□□□ 0.11
ACTB-204ENST00000425660 KCNU1A8MYU2 1149 aa15.71■□□□□ 0.1
ACTB-204ENST00000425660 KCNN4O15554 427 aa15.71■□□□□ 0.1
ACTB-204ENST00000425660 RIPK2O43353 540 aa15.71■□□□□ 0.1
ACTB-204ENST00000425660 MFSD11O43934 449 aa15.71■□□□□ 0.1
ACTB-204ENST00000425660 RNF40O75150 1001 aa15.71■□□□□ 0.1
ACTB-204ENST00000425660 ERCC2P18074 760 aa15.71■□□□□ 0.1
ACTB-204ENST00000425660 RPL17P18621 184 aaKnown RBP15.71■□□□□ 0.1
ACTB-204ENST00000425660 HTR7P34969 479 aa15.71■□□□□ 0.1
ACTB-204ENST00000425660 PPM1AP35813 382 aa15.71■□□□□ 0.1
ACTB-204ENST00000425660 TPI1P60174 286 aa15.71■□□□□ 0.1
ACTB-204ENST00000425660 HTRA4P83105 476 aaPredicted RBP15.71■□□□□ 0.1
ACTB-204ENST00000425660 ZNF844Q08AG5 666 aa15.71■□□□□ 0.1
ACTB-204ENST00000425660 TAF10Q12962 218 aa15.71■□□□□ 0.1
ACTB-204ENST00000425660 FBXO32Q969P5 355 aa15.71■□□□□ 0.1
ACTB-204ENST00000425660 SLC39A13Q96H72 371 aa15.71■□□□□ 0.1
ACTB-204ENST00000425660 YME1L1Q96TA2 773 aa15.71■□□□□ 0.1
ACTB-204ENST00000425660 CDC42EP4Q9H3Q1 356 aaKnown RBP15.71■□□□□ 0.1
ACTB-204ENST00000425660 TLR8Q9NR97 1041 aaKnown RBP15.71■□□□□ 0.1
ACTB-204ENST00000425660 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.71■□□□□ 0.14e-25■□□□□ 10.3
ACTB-204ENST00000425660 PAK5Q9P286 719 aa15.71■□□□□ 0.1
ACTB-204ENST00000425660 STK39Q9UEW8 545 aa15.71■□□□□ 0.1
ACTB-204ENST00000425660 NEU3Q9UQ49 428 aa15.71■□□□□ 0.1
ACTB-204ENST00000425660 GOLGA8KD6RF30 607 aa15.7■□□□□ 0.1
ACTB-204ENST00000425660 LRIG2O94898 1065 aa15.7■□□□□ 0.1
ACTB-204ENST00000425660 GJB5O95377 273 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms