RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 BTBD8Q5XKL5 378 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 TTC19Q6DKK2 380 aaPredicted RBP15.56■□□□□ 0.08
CALD1-206ENST00000424922 RHBDF2Q6PJF5 856 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 TMC7Q7Z402 723 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 BNIPLQ7Z465 357 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 SPRED2Q7Z698 418 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 SPATS2Q86XZ4 545 aaKnown RBP15.56■□□□□ 0.08
CALD1-206ENST00000424922 CCDC185Q8N715 623 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 C1orf54Q8WWF1 131 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 C17orf80Q9BSJ5 609 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 SNRNP25Q9BV90 132 aaKnown RBP15.56■□□□□ 0.08
CALD1-206ENST00000424922 CNOT10Q9H9A5 744 aaKnown RBP15.56■□□□□ 0.08
CALD1-206ENST00000424922 NMUR1Q9HB89 426 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 CYP4F11Q9HBI6 524 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.56■□□□□ 0.08
CALD1-206ENST00000424922 ABCC13Q9NSE7 274 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 IL37Q9NZH6 218 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 NOVA2Q9UNW9 492 aaKnown RBP15.56■□□□□ 0.08
CALD1-206ENST00000424922 CHD7Q9P2D1 2997 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 CCT5P48643 541 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 CDH6P55285 790 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 ADCY2Q08462 1091 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 ERMARDQ5T6L9 678 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 B4GALNT4Q76KP1 1039 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 MON1AQ86VX9 555 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 TEKT4Q8WW24 435 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 FBXO32Q969P5 355 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 SNF8Q96H20 258 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 TRIM62Q9BVG3 475 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 CALN1Q9BXU9 219 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 DDIT4Q9NX09 232 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 GMIPQ9P107 970 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 FNIP2Q9P278 1114 aa15.56■□□□□ 0.08
CALD1-206ENST00000424922 hCG_1818297A0A087WSY0 165 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 SLC38A8A6NNN8 435 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 ARHGEF15O94989 841 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 CXCL14O95715 111 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 CNPP09543 421 aaKnown RBP15.55■□□□□ 0.08
CALD1-206ENST00000424922 IVDP26440 423 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 HPDP32754 393 aaPredicted RBP15.55■□□□□ 0.08
CALD1-206ENST00000424922 CA9Q16790 459 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 C6orf118Q5T5N4 469 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 GPR65Q8IYL9 337 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 SEMA4AQ9H3S1 761 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 RXFP1Q9HBX9 757 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 OSER1Q9NX31 292 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 RRN3Q9NYV6 651 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 MAGED2Q9UNF1 606 aaPredicted RBP15.55■□□□□ 0.08
CALD1-206ENST00000424922 SSX2IPQ9Y2D8 614 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 NEU2Q9Y3R4 380 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 LAMA3Q16787 3333 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 MYO9BQ13459 2157 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 ATXN2Q99700 1313 aaKnown RBP15.55■□□□□ 0.08
CALD1-206ENST00000424922 ANAPC1Q9H1A4 1944 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.55■□□□□ 0.08
CALD1-206ENST00000424922 FAM92AA1XBS5 289 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 NDUFAB1O14561 156 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 MDM4O15151 490 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 RIPK2O43353 540 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 PTPN7P35236 360 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 ERVFC1P60507 584 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 MAGOHP61326 146 aaKnown RBP15.55■□□□□ 0.08
CALD1-206ENST00000424922 CREMQ03060 361 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 TAF10Q12962 218 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 KRT81Q14533 505 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 SLC29A2Q14542 456 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 KCTD19Q17RG1 926 aaPredicted RBP15.55■□□□□ 0.08
CALD1-206ENST00000424922 BEND5Q7L4P6 421 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 TAC4Q86UU9 113 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 BBOF1Q8ND07 529 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 DQX1Q8TE96 717 aaKnown RBP15.55■□□□□ 0.08
CALD1-206ENST00000424922 TCF25Q9BQ70 676 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 MAGEB5Q9BZ81 275 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 ROPN1BQ9BZX4 212 aaPredicted RBP15.55■□□□□ 0.08
CALD1-206ENST00000424922 ROPN1Q9HAT0 212 aaPredicted RBP15.55■□□□□ 0.08
CALD1-206ENST00000424922 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.55■□□□□ 0.08
CALD1-206ENST00000424922 HSFX1Q9UBD0 423 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 NUDT5Q9UKK9 219 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 RWDD3Q9Y3V2 267 aa15.55■□□□□ 0.08
CALD1-206ENST00000424922 CHD9Q3L8U1 2897 aa15.54■□□□□ 0.08
CALD1-206ENST00000424922 MYO1CO00159 1063 aa15.54■□□□□ 0.08
CALD1-206ENST00000424922 PRRG1O14668 218 aa15.54■□□□□ 0.08
CALD1-206ENST00000424922 TP73O15350 636 aa15.54■□□□□ 0.08
CALD1-206ENST00000424922 TJP3O95049 919 aa15.54■□□□□ 0.08
CALD1-206ENST00000424922 SHBGP04278 402 aa15.54■□□□□ 0.08
CALD1-206ENST00000424922 SPATA31D3P0C874 917 aa15.54■□□□□ 0.08
CALD1-206ENST00000424922 ELF1P32519 619 aa15.54■□□□□ 0.08
CALD1-206ENST00000424922 ARSEP51690 589 aa15.54■□□□□ 0.08
CALD1-206ENST00000424922 MMRN1Q13201 1228 aa15.54■□□□□ 0.08
CALD1-206ENST00000424922 PPP6R3Q5H9R7 873 aaPredicted RBP15.54■□□□□ 0.08
CALD1-206ENST00000424922 SPATA31D4Q6ZUB0 917 aa15.54■□□□□ 0.08
CALD1-206ENST00000424922 CENPTQ96BT3 561 aa15.54■□□□□ 0.08
CALD1-206ENST00000424922 PGAP3Q96FM1 320 aaPredicted RBP15.54■□□□□ 0.08
CALD1-206ENST00000424922 STMN4Q9H169 189 aaPredicted RBP15.54■□□□□ 0.08
CALD1-206ENST00000424922 DHX35Q9H5Z1 703 aaKnown RBP15.54■□□□□ 0.08
CALD1-206ENST00000424922 WDR6Q9NNW5 1121 aaKnown RBP15.54■□□□□ 0.08
CALD1-206ENST00000424922 ENTPD7Q9NQZ7 604 aa15.54■□□□□ 0.08
CALD1-206ENST00000424922 TMPRSS4Q9NRS4 437 aa15.54■□□□□ 0.08
CALD1-206ENST00000424922 ASIC3Q9UHC3 531 aa15.54■□□□□ 0.08
CALD1-206ENST00000424922 GGA2Q9UJY4 613 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms