RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 PCDHA11Q9Y5I1 949 aa13.09□□□□□ -0.31
CTCFL-204ENST00000422869 AP4B1Q9Y6B7 739 aa13.09□□□□□ -0.31
CTCFL-204ENST00000422869 TPP1O14773 563 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 ADCY6O43306 1168 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 DKC1O60832 514 aaKnown RBP eCLIP13.08□□□□□ -0.31
CTCFL-204ENST00000422869 TNFAIP8O95379 198 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 SRGAP2CP0DJJ0 459 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 SRGAP2BP0DMP2 458 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 CD19P15391 556 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 IL4RP24394 825 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 SLC5A2P31639 672 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 NAMPTP43490 491 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 TFDP2Q14188 446 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 USP41Q3LFD5 358 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 TRNP1Q6NT89 227 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 ALDH16A1Q8IZ83 802 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 C8orf37Q96NL8 207 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 CATSPER2Q96P56 530 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 KCNK16Q96T55 309 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 XYLT2Q9H1B5 865 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 IFT122Q9HBG6 1241 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 TIMMDC1Q9NPL8 285 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 RIMS3Q9UJD0 308 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 HEY1Q9Y5J3 304 aa13.08□□□□□ -0.31
CTCFL-204ENST00000422869 GLRA3O75311 464 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 METTL18O95568 372 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 GRIA1P42261 906 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 CREB5Q02930 508 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 ORC1Q13415 861 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 ACAP1Q15027 740 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 VSIG10LQ86VR7 867 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 PQLC3Q8N755 202 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 FAM151AQ8WW52 585 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 GPRASP2Q96D09 838 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 PRPF18Q99633 342 aaKnown RBP13.08□□□□□ -0.32
CTCFL-204ENST00000422869 ZNF341Q9BYN7 854 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 Q9H521 79 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 ZBED1O96006 694 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 HMGCRP04035 888 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 CNTFP26441 200 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 RAP1GAPP47736 663 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 AP3M2P53677 418 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 ACTR2P61160 394 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 POTEAQ6S8J7 498 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 ABHD15Q6UXT9 468 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.08□□□□□ -0.32
CTCFL-204ENST00000422869 PPP4R1Q8TF05 950 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 MCRS1Q96EZ8 462 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 RTKNQ9BST9 563 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 JPH1Q9HDC5 661 aaPredicted RBP13.08□□□□□ -0.32
CTCFL-204ENST00000422869 MAN1C1Q9NR34 630 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 STK39Q9UEW8 545 aa13.08□□□□□ -0.32
CTCFL-204ENST00000422869 BCLAF3A2AJT9 711 aaKnown RBP13.07□□□□□ -0.32
CTCFL-204ENST00000422869 GRK2P25098 689 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 PRDX6P30041 224 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 ARL2P36404 184 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 HARS2P49590 506 aaKnown RBP13.07□□□□□ -0.32
CTCFL-204ENST00000422869 ZNF143P52747 638 aaPredicted RBP13.07□□□□□ -0.32
CTCFL-204ENST00000422869 KLF10Q13118 480 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 ADGRE1Q14246 886 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 ZNF699Q32M78 642 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 DUS1LQ6P1R4 473 aaKnown RBP13.07□□□□□ -0.32
CTCFL-204ENST00000422869 ILDR2Q71H61 639 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 ZNF410Q86VK4 478 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 LILRA2Q8N149 483 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 ACMSDQ8TDX5 336 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 OXCT2Q9BYC2 517 aaPredicted RBP13.07□□□□□ -0.32
CTCFL-204ENST00000422869 FAM96AQ9H5X1 160 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 SPDYE16A6NNV3 312 aaPredicted RBP13.07□□□□□ -0.32
CTCFL-204ENST00000422869 TPD52L2O43399 206 aaKnown RBP13.07□□□□□ -0.32
CTCFL-204ENST00000422869 GMPRP36959 345 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 HDAC4P56524 1084 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 ABCE1P61221 599 aaKnown RBP13.07□□□□□ -0.32
CTCFL-204ENST00000422869 CYLC2Q14093 348 aaPredicted RBP13.07□□□□□ -0.32
CTCFL-204ENST00000422869 C15orf59Q2T9L4 293 aaPredicted RBP13.07□□□□□ -0.32
CTCFL-204ENST00000422869 XKR3Q5GH77 459 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 RARS2Q5T160 578 aaKnown RBP13.07□□□□□ -0.32
CTCFL-204ENST00000422869 C6orf52Q5T4I8 152 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 BORAQ6PGQ7 559 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 IYDQ6PHW0 289 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 MRPL1Q9BYD6 325 aaKnown RBP13.07□□□□□ -0.32
CTCFL-204ENST00000422869 ASNSD1Q9NWL6 643 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 TMOD2Q9NZR1 351 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 COPG2Q9UBF2 871 aa13.07□□□□□ -0.32
CTCFL-204ENST00000422869 ANK1P16157 1881 aa13.06□□□□□ -0.32
CTCFL-204ENST00000422869 E9PBE3 544 aa13.06□□□□□ -0.32
CTCFL-204ENST00000422869 KLHL41O60662 606 aa13.06□□□□□ -0.32
CTCFL-204ENST00000422869 NR3C2P08235 984 aa13.06□□□□□ -0.32
CTCFL-204ENST00000422869 DESP17661 470 aa13.06□□□□□ -0.32
CTCFL-204ENST00000422869 CCND2P30279 289 aa13.06□□□□□ -0.32
CTCFL-204ENST00000422869 CLCN2P51788 898 aa13.06□□□□□ -0.32
CTCFL-204ENST00000422869 MRPS22P82650 360 aaKnown RBP13.06□□□□□ -0.32
CTCFL-204ENST00000422869 CDKL1Q00532 357 aa13.06□□□□□ -0.32
CTCFL-204ENST00000422869 SULT2A1Q06520 285 aa13.06□□□□□ -0.32
CTCFL-204ENST00000422869 NIPAL4Q0D2K0 466 aa13.06□□□□□ -0.32
CTCFL-204ENST00000422869 GRM1Q13255 1194 aa13.06□□□□□ -0.32
CTCFL-204ENST00000422869 KRT81Q14533 505 aa13.06□□□□□ -0.32
CTCFL-204ENST00000422869 HSP90AA5PQ58FG0 334 aa13.06□□□□□ -0.32
CTCFL-204ENST00000422869 ACBD5Q5T8D3 534 aaPredicted RBP13.06□□□□□ -0.32
CTCFL-204ENST00000422869 ZBTB33Q86T24 672 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms