RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 H2AFZP0C0S5 128 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 GPD1P21695 349 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 SDC4P31431 198 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 SOX9P48436 509 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 GSDMDP57764 484 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 PFKPQ01813 784 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 OGDHQ02218 1023 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 DEUP1Q05D60 604 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 RING1Q06587 406 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 NNTQ13423 1086 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 RUNX3Q13761 415 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 DHCR24Q15392 516 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 CDO1Q16878 200 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 SLC44A4Q53GD3 710 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 RAB6CQ53S08 254 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 NUGGCQ68CJ6 796 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 RHBDF2Q6PJF5 856 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 RAD9BQ6WBX8 426 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 H2AFVQ71UI9 128 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 TMEM139Q8IV31 216 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 UNC45BQ8IWX7 931 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 CSGALNACT1Q8TDX6 532 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 EDAQ92838 391 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 ATP2A3Q93084 1043 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 TRIM7Q9C029 511 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 RAB6CQ9H0N0 254 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 ECT2Q9H8V3 914 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 MRPL47Q9HD33 250 aaKnown RBP9.64□□□□□ -0.87
PDGFC-202ENST00000422544 TRPV5Q9NQA5 729 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 HEBP1Q9NRV9 189 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 PIGVQ9NUD9 493 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.64□□□□□ -0.87
PDGFC-202ENST00000422544 XPO7Q9UIA9 1087 aaKnown RBP9.64□□□□□ -0.87
PDGFC-202ENST00000422544 FBXL21Q9UKT6 434 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 CA14Q9ULX7 337 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 ZNF510Q9Y2H8 683 aa9.64□□□□□ -0.87
PDGFC-202ENST00000422544 GOLGA6L7A0A1B0GV03 622 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 KCNU1A8MYU2 1149 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 EIF3CLB5ME19 914 aaKnown RBP9.63□□□□□ -0.87
PDGFC-202ENST00000422544 TRDMT1O14717 391 aaKnown RBP9.63□□□□□ -0.87
PDGFC-202ENST00000422544 ENDOD1O94919 500 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 NFATC1O95644 943 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 MOCS2O96007 188 aaPredicted RBP9.63□□□□□ -0.87
PDGFC-202ENST00000422544 F9P00740 461 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 CCR1P32246 355 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 RDXP35241 583 aaKnown RBP9.63□□□□□ -0.87
PDGFC-202ENST00000422544 CYLC1P35663 651 aaPredicted RBP9.63□□□□□ -0.87
PDGFC-202ENST00000422544 MAGEA1P43355 309 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 PTPN9P43378 593 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 SLC11A2P49281 568 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 CXCR3P49682 368 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 ZNF143P52747 638 aaPredicted RBP9.63□□□□□ -0.87
PDGFC-202ENST00000422544 VCPP55072 806 aaKnown RBP9.63□□□□□ -0.87
PDGFC-202ENST00000422544 SPA17Q15506 151 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 ITPRIPL2Q3MIP1 535 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 LY6G5CQ5SRR4 150 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 TPGS1Q6ZTW0 290 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 SND1Q7KZF4 910 aaKnown RBP eCLIP9.63□□□□□ -0.87
PDGFC-202ENST00000422544 BNIPLQ7Z465 357 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 TMEM25Q86YD3 366 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 CPA6Q8N4T0 437 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 FAM172AQ8WUF8 416 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 CTNNBL1Q8WYA6 563 aaPredicted RBP9.63□□□□□ -0.87
PDGFC-202ENST00000422544 ANP32BQ92688 251 aaKnown RBP9.63□□□□□ -0.87
PDGFC-202ENST00000422544 DNASE1L2Q92874 299 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 OTUB2Q96DC9 234 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 PGAP3Q96FM1 320 aaPredicted RBP9.63□□□□□ -0.87
PDGFC-202ENST00000422544 EIF3CQ99613 913 aaKnown RBP9.63□□□□□ -0.87
PDGFC-202ENST00000422544 CNPY3Q9BT09 278 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 NUP85Q9BW27 656 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 WDCPQ9H6R7 721 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 SPHK2Q9NRA0 654 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 FAM86C1Q9NVL1 165 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 WNT16Q9UBV4 365 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 SLC12A6Q9UHW9 1150 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 PCDHA13Q9Y5I0 950 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 SCINQ9Y6U3 715 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 OBSL1O75147 1896 aa9.63□□□□□ -0.87
PDGFC-202ENST00000422544 DENND4CQ5VZ89 1909 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 MYO16Q9Y6X6 1858 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 KRBA1A5PL33 1030 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 CCP110O43303 1012 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 ACSL4O60488 711 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 TSPAN3O60637 253 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 NDUFA10O95299 355 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 LCA5LO95447 670 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 APOEP02649 317 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 CYP17A1P05093 508 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 TMEM253P0C7T8 217 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 SLC2A3P11169 496 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 CD72P21854 359 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 PSMA2P25787 234 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 GJA4P35212 333 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 CHKAP35790 457 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 HDAC4P56524 1084 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 SIGLEC14Q08ET2 396 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 ZNF252P-AS1Q0IIN9 211 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 NR1H3Q13133 447 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 PPP2R5DQ14738 602 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 MLF2Q15773 248 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms