RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 TNPO3Q9Y5L0 923 aaKnown RBP5.56□□□□□ -1.52
SFXN1-202ENST00000421887 FASNP49327 2511 aaKnown RBP5.56□□□□□ -1.52
SFXN1-202ENST00000421887 DOCK5Q9H7D0 1870 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 ABCB11O95342 1321 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 DENND3A2RUS2 1198 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 TBC1D4O60343 1298 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 ALDH1A2O94788 518 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 SPDEFO95238 335 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 TGFB3P10600 412 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 TRIM27P14373 513 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 ZSCAN20P17040 1043 aaPredicted RBP5.55□□□□□ -1.52
SFXN1-202ENST00000421887 HOXC8P31273 242 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 CD52P31358 61 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 CSTF1Q05048 431 aaKnown RBP5.55□□□□□ -1.52
SFXN1-202ENST00000421887 SRSF4Q08170 494 aaKnown RBP5.55□□□□□ -1.52
SFXN1-202ENST00000421887 MRPL49Q13405 166 aaKnown RBP5.55□□□□□ -1.52
SFXN1-202ENST00000421887 MTERF2Q49AM1 385 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 RASGRP2Q7LDG7 609 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 DNAJB3Q8WWF6 145 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 STAMQ92783 540 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 KIF1BPQ96EK5 621 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 ADAM2Q99965 735 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 NAPBQ9H115 298 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 ARHGEF3Q9NR81 526 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 TOMM22Q9NS69 142 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 TYW1Q9NV66 732 aaKnown RBP5.55□□□□□ -1.52
SFXN1-202ENST00000421887 ZSCAN32Q9NX65 697 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 TUBE1Q9UJT0 475 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 MRPS23Q9Y3D9 190 aaKnown RBP5.55□□□□□ -1.52
SFXN1-202ENST00000421887 CDY2AQ9Y6F7 541 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 SQORQ9Y6N5 450 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 PATJQ8NI35 1801 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 C2orf16Q68DN1 1984 aa5.55□□□□□ -1.52
SFXN1-202ENST00000421887 GPR179Q6PRD1 2367 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 LRRC3CA6NJW4 275 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 GPAA1O43292 621 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 ANP32CO43423 234 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 DHX16O60231 1041 aaKnown RBP5.54□□□□□ -1.52
SFXN1-202ENST00000421887 NMT2O60551 498 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 APOL3O95236 402 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 GAAP10253 952 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 ARP10275 920 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 EGR2P11161 476 aaPredicted RBP5.54□□□□□ -1.52
SFXN1-202ENST00000421887 TOP1P11387 765 aaKnown RBP5.54□□□□□ -1.52
SFXN1-202ENST00000421887 ATP5JP18859 108 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 UBA1P22314 1058 aaKnown RBP5.54□□□□□ -1.52
SFXN1-202ENST00000421887 GATMP50440 423 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 ANAPC15P60006 121 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 MRPS6P82932 125 aaKnown RBP5.54□□□□□ -1.52
SFXN1-202ENST00000421887 SHC2P98077 582 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 PPARAQ07869 468 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 RAB33AQ14088 237 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 GIT2Q14161 759 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 NEDD9Q14511 834 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 MYBPC3Q14896 1274 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 PTPN14Q15678 1187 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 LETM2Q2VYF4 491 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 PDCD4Q53EL6 469 aaKnown RBP5.54□□□□□ -1.52
SFXN1-202ENST00000421887 ODR4Q5SWX8 454 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 UTP14CQ5TAP6 766 aaKnown RBP5.54□□□□□ -1.52
SFXN1-202ENST00000421887 DCLRE1AQ6PJP8 1040 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 DOK3Q7L591 496 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 FTSJ3Q8IY81 847 aaKnown RBP5.54□□□□□ -1.52
SFXN1-202ENST00000421887 C12orf76Q8N812 135 aaPredicted RBP5.54□□□□□ -1.52
SFXN1-202ENST00000421887 MRPL43Q8N983 215 aaKnown RBP5.54□□□□□ -1.52
SFXN1-202ENST00000421887 PJA1Q8NG27 643 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 GLG1Q92896 1179 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 TNPO1Q92973 898 aaKnown RBP5.54□□□□□ -1.52
SFXN1-202ENST00000421887 ZNF558Q96NG5 402 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 DEPDC7Q96QD5 511 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 OSBPL6Q9BZF3 934 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 MTG2Q9H4K7 406 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 SFXN1Q9H9B4 322 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 PXMP2Q9NR77 195 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 IL17RBQ9NRM6 502 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 INTS7Q9NVH2 962 aaKnown RBP5.54□□□□□ -1.52
SFXN1-202ENST00000421887 PADI3Q9ULW8 664 aa5.54□□□□□ -1.52
SFXN1-202ENST00000421887 MRPL11Q9Y3B7 192 aaKnown RBP5.54□□□□□ -1.52
SFXN1-202ENST00000421887 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.54□□□□□ -1.52
SFXN1-202ENST00000421887 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.53□□□□□ -1.52
SFXN1-202ENST00000421887 EIF4E1BA6NMX2 242 aaKnown RBP5.53□□□□□ -1.52
SFXN1-202ENST00000421887 DIRC3C9JPN6 131 aa5.53□□□□□ -1.52
SFXN1-202ENST00000421887 NCAM2O15394 837 aa5.53□□□□□ -1.52
SFXN1-202ENST00000421887 MAFGO15525 162 aa5.53□□□□□ -1.52
SFXN1-202ENST00000421887 LRP3O75074 770 aa5.53□□□□□ -1.52
SFXN1-202ENST00000421887 ZFPL1O95159 310 aa5.53□□□□□ -1.52
SFXN1-202ENST00000421887 CXCL14O95715 111 aa5.53□□□□□ -1.52
SFXN1-202ENST00000421887 FAM153BP0C7A2 387 aa5.53□□□□□ -1.52
SFXN1-202ENST00000421887 SPATA31D3P0C874 917 aa5.53□□□□□ -1.52
SFXN1-202ENST00000421887 PDHBP11177 359 aa5.53□□□□□ -1.52
SFXN1-202ENST00000421887 CCND2P30279 289 aa5.53□□□□□ -1.52
SFXN1-202ENST00000421887 ALDH7A1P49419 539 aaKnown RBP5.53□□□□□ -1.52
SFXN1-202ENST00000421887 WNT3AP56704 352 aa5.53□□□□□ -1.52
SFXN1-202ENST00000421887 SP4Q02446 784 aa5.53□□□□□ -1.52
SFXN1-202ENST00000421887 MGAT3Q09327 533 aa5.53□□□□□ -1.52
SFXN1-202ENST00000421887 RESTQ13127 1097 aa5.53□□□□□ -1.52
SFXN1-202ENST00000421887 PPFIA1Q13136 1202 aa5.53□□□□□ -1.52
SFXN1-202ENST00000421887 UBXN2BQ14CS0 331 aa5.53□□□□□ -1.52
SFXN1-202ENST00000421887 CDC37Q16543 378 aaPredicted RBP5.53□□□□□ -1.52
SFXN1-202ENST00000421887 GPATCH4Q5T3I0 446 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms