RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 SLC39A13Q96H72 371 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 VCPIP1Q96JH7 1222 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 CFAP57Q96MR6 1250 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 PNKPQ96T60 521 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 TBCBQ99426 244 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 NPY6RQ99463 290 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 RBM12Q9NTZ6 932 aaKnown RBP16.37■□□□□ 0.21
BRAT1-202ENST00000421712 ABHD10Q9NUJ1 306 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 DEC1Q9P2X7 70 aa16.37■□□□□ 0.21
BRAT1-202ENST00000421712 COL4A2P08572 1712 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 SIGLEC16A6NMB1 481 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.36■□□□□ 0.21
BRAT1-202ENST00000421712 EGFP01133 1207 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 IGLV3-25P01717 112 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 APODP05090 189 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 CHRNB1P11230 501 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 TFE3P19532 575 aaPredicted RBP16.36■□□□□ 0.21
BRAT1-202ENST00000421712 DRD1P21728 446 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 RRM1P23921 792 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 SDC4P31431 198 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 EIF4A3P38919 411 aaKnown RBP16.36■□□□□ 0.21
BRAT1-202ENST00000421712 OPRD1P41143 372 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 KDSRQ06136 332 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 CDO1Q16878 200 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 PREPLQ4J6C6 727 aaPredicted RBP16.36■□□□□ 0.21
BRAT1-202ENST00000421712 MPPE1Q53F39 396 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 TMEM196Q5HYL7 178 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 DGKKQ5KSL6 1271 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 ARCQ7LC44 396 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 C12orf40Q86WS4 652 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 JOSD2Q8TAC2 188 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 AZIN2Q96A70 460 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 TMA16Q96EY4 203 aaKnown RBP16.36■□□□□ 0.21
BRAT1-202ENST00000421712 MRFAP1L1Q96HT8 127 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 BTN2A3PQ96KV6 586 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 DNAJC7Q99615 494 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 WDCPQ9H6R7 721 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 FBRSL1Q9HCM7 1045 aaKnown RBP16.36■□□□□ 0.21
BRAT1-202ENST00000421712 ARHGEF4Q9NR80 690 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 DNAJC17Q9NVM6 304 aaKnown RBP16.36■□□□□ 0.21
BRAT1-202ENST00000421712 ARHGAP20Q9P2F6 1191 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 MYO1AQ9UBC5 1043 aa16.36■□□□□ 0.21
BRAT1-202ENST00000421712 MIA3Q5JRA6 1907 aa16.35■□□□□ 0.21
BRAT1-202ENST00000421712 TYW5A2RUC4 315 aaKnown RBP16.35■□□□□ 0.21
BRAT1-202ENST00000421712 ATMINO43313 823 aaPredicted RBP16.35■□□□□ 0.21
BRAT1-202ENST00000421712 DESP17661 470 aa16.35■□□□□ 0.21
BRAT1-202ENST00000421712 HNRNPH3P31942 346 aaKnown RBP16.35■□□□□ 0.21
BRAT1-202ENST00000421712 RFC1P35251 1148 aaPredicted RBP16.35■□□□□ 0.21
BRAT1-202ENST00000421712 GSCP56915 257 aaPredicted RBP16.35■□□□□ 0.21
BRAT1-202ENST00000421712 TBX2Q13207 712 aaPredicted RBP16.35■□□□□ 0.21
BRAT1-202ENST00000421712 GAB4Q2WGN9 574 aa16.35■□□□□ 0.21
BRAT1-202ENST00000421712 CCDC122Q5T0U0 273 aa16.35■□□□□ 0.21
BRAT1-202ENST00000421712 GRAMD4Q6IC98 578 aa16.35■□□□□ 0.21
BRAT1-202ENST00000421712 FSTL4Q6MZW2 842 aa16.35■□□□□ 0.21
BRAT1-202ENST00000421712 TRNP1Q6NT89 227 aa16.35■□□□□ 0.21
BRAT1-202ENST00000421712 RFWD3Q6PCD5 774 aa16.35■□□□□ 0.21
BRAT1-202ENST00000421712 NUDT18Q6ZVK8 323 aa16.35■□□□□ 0.21
BRAT1-202ENST00000421712 OLIG1Q8TAK6 271 aa16.35■□□□□ 0.21
BRAT1-202ENST00000421712 ZNF653Q96CK0 615 aa16.35■□□□□ 0.21
BRAT1-202ENST00000421712 TRIM11Q96F44 468 aa16.35■□□□□ 0.21
BRAT1-202ENST00000421712 MCEEQ96PE7 176 aa16.35■□□□□ 0.21
BRAT1-202ENST00000421712 PARVAQ9NVD7 372 aa16.35■□□□□ 0.21
BRAT1-202ENST00000421712 SPATA6Q9NWH7 488 aaPredicted RBP16.35■□□□□ 0.21
BRAT1-202ENST00000421712 MARK1Q9P0L2 795 aa16.35■□□□□ 0.21
BRAT1-202ENST00000421712 CNOT8Q9UFF9 292 aaKnown RBP16.35■□□□□ 0.21
BRAT1-202ENST00000421712 XPO7Q9UIA9 1087 aaKnown RBP16.35■□□□□ 0.21
BRAT1-202ENST00000421712 PAXBP1Q9Y5B6 917 aa16.35■□□□□ 0.21
BRAT1-202ENST00000421712 ZDBF2Q9HCK1 2354 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 A0A087X0T9 212 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 TBC1D3BA6NDS4 549 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 C2CD4BA6NLJ0 364 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 KCNU1A8MYU2 1149 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 AKR1B10O60218 316 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 TULP3O75386 442 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 FAM228BP0C875 321 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 GPD1P21695 349 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 RDXP35241 583 aaKnown RBP16.34■□□□□ 0.21
BRAT1-202ENST00000421712 EIF2DP41214 584 aaKnown RBP16.34■□□□□ 0.21
BRAT1-202ENST00000421712 MAGEA9P43362 315 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 SEC13P55735 322 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 PPP2R5DQ14738 602 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 C15orf59Q2T9L4 293 aaPredicted RBP16.34■□□□□ 0.21
BRAT1-202ENST00000421712 RAP1GAP2Q684P5 730 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 ALKBH5Q6P6C2 394 aaKnown RBP16.34■□□□□ 0.21
BRAT1-202ENST00000421712 WDR59Q6PJI9 974 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 CHSY1Q86X52 802 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 CCDC117Q8IWD4 279 aaPredicted RBP16.34■□□□□ 0.21
BRAT1-202ENST00000421712 FAM217AQ8IXS0 508 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 LGI2Q8N0V4 545 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 DTWD2Q8NBA8 298 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 CLDN23Q96B33 292 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 CCDC42Q96M95 316 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 TKTL2Q9H0I9 626 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 PIGVQ9NUD9 493 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 TMEM51Q9NW97 253 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 STIM2Q9P246 746 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 STOML2Q9UJZ1 356 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 ATG2BQ96BY7 2078 aa16.34■□□□□ 0.21
BRAT1-202ENST00000421712 F5H5T6 163 aa16.33■□□□□ 0.2
BRAT1-202ENST00000421712 CACNG3O60359 315 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms