RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 RPS6KA1Q15418 735 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 ARL13BQ3SXY8 428 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 KCNT1Q5JUK3 1230 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 NUGGCQ68CJ6 796 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 SYT10Q6XYQ8 523 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 POLNQ7Z5Q5 900 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 ATP6V0D2Q8N8Y2 350 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 ZSCAN18Q8TBC5 510 aaPredicted RBP12.96□□□□□ -0.33
TMEM53-206ENST00000420706 TEKT4Q8WW24 435 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 AZIN2Q96A70 460 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 MYADMQ96S97 322 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 SNRNP25Q9BV90 132 aaKnown RBP12.96□□□□□ -0.33
TMEM53-206ENST00000420706 TDP1Q9NUW8 608 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 SLC12A6Q9UHW9 1150 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 DNAI1Q9UI46 699 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 CDH7Q9ULB5 785 aa12.96□□□□□ -0.33
TMEM53-206ENST00000420706 ACSL4O60488 711 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 PAGE1O75459 146 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 SLC34A2O95436 690 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 APOEP02649 317 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 KLKB1P03952 638 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 ATP1A1P05023 1023 aaKnown RBP12.95□□□□□ -0.34
TMEM53-206ENST00000420706 IRF1P10914 325 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 GJC1P36383 396 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 MARCKSL1P49006 195 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 HARS2P49590 506 aaKnown RBP12.95□□□□□ -0.34
TMEM53-206ENST00000420706 ARSEP51690 589 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 SCAPQ12770 1279 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 SMAD4Q13485 552 aaKnown RBP12.95□□□□□ -0.34
TMEM53-206ENST00000420706 CA9Q16790 459 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 SMTNL2Q2TAL5 461 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 FAM78AQ5JUQ0 283 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 HTR3DQ70Z44 454 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 DDX42Q86XP3 938 aaKnown RBP eCLIP12.95□□□□□ -0.34
TMEM53-206ENST00000420706 PSTKQ8IV42 348 aaKnown RBP12.95□□□□□ -0.34
TMEM53-206ENST00000420706 UBL4BQ8N7F7 174 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 SH3RF2Q8TEC5 729 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 BTN2A3PQ96KV6 586 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 HAPLN3Q96S86 360 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 DCLK3Q9C098 648 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 OSBPL2Q9H1P3 480 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 GPATCH2LQ9NWQ4 482 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 DDX56Q9NY93 547 aaKnown RBP12.95□□□□□ -0.34
TMEM53-206ENST00000420706 CFAP97Q9P2B7 532 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 XPO7Q9UIA9 1087 aaKnown RBP12.95□□□□□ -0.34
TMEM53-206ENST00000420706 AP4E1Q9UPM8 1137 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 CCL26Q9Y258 94 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.95□□□□□ -0.34
TMEM53-206ENST00000420706 TRANK1O15050 2925 aa12.95□□□□□ -0.34
TMEM53-206ENST00000420706 HELZP42694 1942 aaKnown RBP12.94□□□□□ -0.34
TMEM53-206ENST00000420706 DENND4AQ7Z401 1863 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 KIF2AO00139 706 aaPredicted RBP12.94□□□□□ -0.34
TMEM53-206ENST00000420706 PRAMEF12O95522 483 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 MOCS2O96007 188 aaPredicted RBP12.94□□□□□ -0.34
TMEM53-206ENST00000420706 LAMP2P13473 410 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 KDELR1P24390 212 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 CORO1AP31146 461 aaKnown RBP12.94□□□□□ -0.34
TMEM53-206ENST00000420706 CASQ1P31415 396 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 L1CAMP32004 1257 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 GBP2P32456 591 aaPredicted RBP12.94□□□□□ -0.34
TMEM53-206ENST00000420706 MLLT6P55198 1093 aaPredicted RBP12.94□□□□□ -0.34
TMEM53-206ENST00000420706 RWDD2BP57060 319 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 MTA1Q13330 715 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 LEXMQ3ZCV2 418 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 EFHC2Q5JST6 749 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 Q6ZNB5 142 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 DENND1CQ8IV53 801 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 KATNAL2Q8IYT4 538 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 PYROXD2Q8N2H3 581 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 CELF5Q8N6W0 485 aaKnown RBP12.94□□□□□ -0.34
TMEM53-206ENST00000420706 RIN3Q8TB24 985 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 FAM71BQ8TC56 605 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 RAPGEF5Q92565 580 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 HSPH1Q92598 858 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 ALG3Q92685 438 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 SMARCD2Q92925 531 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 ACSF2Q96CM8 615 aaPredicted RBP12.94□□□□□ -0.34
TMEM53-206ENST00000420706 C1orf74Q96LT6 269 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 ASB16Q96NS5 453 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 KCTD15Q96SI1 283 aaPredicted RBP12.94□□□□□ -0.34
TMEM53-206ENST00000420706 NAPGQ99747 312 aaPredicted RBP12.94□□□□□ -0.34
TMEM53-206ENST00000420706 SIK2Q9H0K1 926 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 DHX35Q9H5Z1 703 aaKnown RBP12.94□□□□□ -0.34
TMEM53-206ENST00000420706 KIF9Q9HAQ2 790 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 TRPV4Q9HBA0 871 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 AGO1Q9UL18 857 aaKnown RBP12.94□□□□□ -0.34
TMEM53-206ENST00000420706 SH3BP1Q9Y3L3 701 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 SNX10Q9Y5X0 201 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 HS3ST4Q9Y661 456 aa12.94□□□□□ -0.34
TMEM53-206ENST00000420706 ZFP37Q9Y6Q3 630 aaPredicted RBP12.94□□□□□ -0.34
TMEM53-206ENST00000420706 NUP210Q8TEM1 1887 aaPredicted RBP12.93□□□□□ -0.34
TMEM53-206ENST00000420706 GOLGA6L7A0A1B0GV03 622 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 E2F8A0AVK6 867 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 CTAGE9A4FU28 777 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 ZRANB2O95218 330 aaKnown RBP eCLIP12.93□□□□□ -0.34
TMEM53-206ENST00000420706 LATS1O95835 1130 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 VIPR2P41587 438 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 DNA2P51530 1060 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 CDH6P55285 790 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 NRG1Q02297 640 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms