RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 OSGEPQ9NPF4 335 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 RPL26L1Q9UNX3 145 aaKnown RBP13.37□□□□□ -0.27
LINC00642-201ENST00000419459 COLQQ9Y215 455 aaPredicted RBP13.37□□□□□ -0.27
LINC00642-201ENST00000419459 SNX24Q9Y343 169 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 RWDD3Q9Y3V2 267 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 NR2E1Q9Y466 385 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 LRRC42Q9Y546 428 aa13.37□□□□□ -0.27
LINC00642-201ENST00000419459 PATJQ8NI35 1801 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 LILRB3O75022 631 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 SKAP2O75563 359 aaPredicted RBP13.36□□□□□ -0.27
LINC00642-201ENST00000419459 UNC5CO95185 931 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 LSM8O95777 96 aaKnown RBP13.36□□□□□ -0.27
LINC00642-201ENST00000419459 NEFHP12036 1026 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 LCP1P13796 627 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 MMP8P22894 467 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 IFNAR2P48551 515 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 NDUFV1P49821 464 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 PTP4A2Q12974 167 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 GPM6BQ13491 265 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 MAPRE1Q15691 268 aaKnown RBP13.36□□□□□ -0.27
LINC00642-201ENST00000419459 CYP1B1Q16678 543 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 TRIM72Q6ZMU5 477 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 C4orf50Q6ZRC1 276 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 RBM23Q86U06 439 aaKnown RBP13.36□□□□□ -0.27
LINC00642-201ENST00000419459 EXOC3L1Q86VI1 746 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 ERICH1Q86X53 443 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 DCP1BQ8IZD4 617 aaKnown RBP13.36□□□□□ -0.27
LINC00642-201ENST00000419459 MCOLN2Q8IZK6 566 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 ART4Q93070 314 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 TIFAQ96CG3 184 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 ZNF653Q96CK0 615 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 KLHL14Q9P2G3 628 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 PCDHA3Q9Y5H8 950 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 GREB1Q4ZG55 1949 aa13.36□□□□□ -0.27
LINC00642-201ENST00000419459 ANKRD62A6NC57 917 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 C2orf71A6NGG8 1288 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 TCP11X1B4DZS4 312 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 PER2O15055 1255 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 SEC24AO95486 1093 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 RPL21P46778 160 aaKnown RBP13.35□□□□□ -0.27
LINC00642-201ENST00000419459 ADIGQ0VDE8 80 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 TAF11Q15544 211 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 RAB30Q15771 203 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 NUGGCQ68CJ6 796 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 LMNTD2Q8IXW0 634 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 SCAMP5Q8TAC9 235 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 ZNF461Q8TAF7 563 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 EPS8L3Q8TE67 593 aaKnown RBP13.35□□□□□ -0.27
LINC00642-201ENST00000419459 DNAI2Q9GZS0 605 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 FGFR1OP2Q9NVK5 253 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 PCDHB5Q9Y5E4 795 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 BACE2Q9Y5Z0 518 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 CARNS1A5YM72 827 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 H3BNC9 293 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 GOLGA8SH3BPF8 625 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 TCEA3O75764 348 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 GRAP2O75791 330 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 SNUPNO95149 360 aaKnown RBP13.35□□□□□ -0.27
LINC00642-201ENST00000419459 PECAM1P16284 738 aaPredicted RBP13.35□□□□□ -0.27
LINC00642-201ENST00000419459 LBRQ14739 615 aaKnown RBP13.35□□□□□ -0.27
LINC00642-201ENST00000419459 TAF5Q15542 800 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 NFE2Q16621 373 aaPredicted RBP13.35□□□□□ -0.27
LINC00642-201ENST00000419459 PTPROQ16827 1216 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 SPDYAQ5MJ70 313 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 PHF13Q86YI8 300 aaPredicted RBP13.35□□□□□ -0.27
LINC00642-201ENST00000419459 AGGF1Q8N302 714 aaeCLIP13.35□□□□□ -0.27
LINC00642-201ENST00000419459 BTBD6Q96KE9 485 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 TMEM237Q96Q45 408 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 DMAP1Q9NPF5 467 aaPredicted RBP13.35□□□□□ -0.27
LINC00642-201ENST00000419459 COG5Q9UP83 839 aa13.35□□□□□ -0.27
LINC00642-201ENST00000419459 TMEM120BA0PK00 339 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 HHLA1C9JL84 531 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 XPO1O14980 1071 aaKnown RBP13.34□□□□□ -0.27
LINC00642-201ENST00000419459 TGM5O43548 720 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 SETSIPP0DME0 302 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 ATF6P18850 670 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 ARHGEF18Q6ZSZ5 1173 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 FAM183BPQ6ZVS7 135 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 MFN1Q8IWA4 741 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 FITM2Q8N6M3 262 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 MRPL43Q8N983 215 aaKnown RBP13.34□□□□□ -0.27
LINC00642-201ENST00000419459 INPP5DQ92835 1189 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 ARHGEF2Q92974 986 aaKnown RBP13.34□□□□□ -0.27
LINC00642-201ENST00000419459 C18orf8Q96DM3 657 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 MAGEB18Q96M61 343 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 OSBPL1AQ9BXW6 950 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 LRMDAQ9H2I8 198 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 RNPEPL1Q9HAU8 725 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 CYP4F11Q9HBI6 524 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 CSNK1G1Q9HCP0 422 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 ETAA1Q9NY74 926 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 CPSF2Q9P2I0 782 aaKnown RBP13.34□□□□□ -0.27
LINC00642-201ENST00000419459 LZTS1Q9Y250 596 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 ACTL7BQ9Y614 415 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 SMIM23A6NLE4 172 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 PAPSS1O43252 624 aaPredicted RBP13.34□□□□□ -0.27
LINC00642-201ENST00000419459 ABLIM3O94929 683 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 RB1P06400 928 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 ATF2P15336 505 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 GNAZP19086 355 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms