RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ABL1P00519 1130 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 CCDC130P13994 396 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 GNSP15586 552 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 MYL5Q02045 173 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 MAN2A1Q16706 1144 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 CDKAL1Q5VV42 579 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 C4orf50Q6ZRC1 276 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 FAM114A1Q8IWE2 563 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 ZCCHC9Q8N567 271 aaKnown RBP18.88■□□□□ 0.61
VCP-202ENST00000417448 MYCBPAPQ8TBZ2 947 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 MRGPRX1Q96LB2 322 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 ZDHHC5Q9C0B5 715 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 ZNF518BQ9C0D4 1074 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 HSD3B7Q9H2F3 369 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 PRDM16Q9HAZ2 1276 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 CISHQ9NSE2 258 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 TMEM30AQ9NV96 361 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 DEC1Q9P2X7 70 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 STARD13Q9Y3M8 1113 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 RAD54BQ9Y620 910 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 MGAQ8IWI9 3026 aa18.88■□□□□ 0.61
VCP-202ENST00000417448 TK2O00142 265 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 HOXC11O43248 304 aaPredicted RBP18.87■□□□□ 0.61
VCP-202ENST00000417448 NDUFS2O75306 463 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 FAM163BP0C2L3 166 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 MBL2P11226 248 aaPredicted RBP18.87■□□□□ 0.61
VCP-202ENST00000417448 ABCG1P45844 678 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 TAF10Q12962 218 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 CUL2Q13617 745 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 KRT31Q15323 416 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 VWA3BQ502W6 1294 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 SYCP2LQ5T4T6 812 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 DBX2Q6ZNG2 339 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 PAQR9Q6ZVX9 377 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 DHX40Q8IX18 779 aaKnown RBP18.87■□□□□ 0.61
VCP-202ENST00000417448 PPM1KQ8N3J5 372 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 FOXJ1Q92949 421 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 WBP2Q969T9 261 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 CEP295NLQ96MC4 621 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 NT5C1BQ96P26 610 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 DCBLD2Q96PD2 775 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 GABRG3Q99928 467 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 MED10Q9BTT4 135 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 NDST4Q9H3R1 872 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 GAREM1Q9H706 876 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 CYP3A43Q9HB55 503 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 TM7SF3Q9NS93 570 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 TBC1D14Q9P2M4 693 aa18.87■□□□□ 0.61
VCP-202ENST00000417448 A0A1B0GTW7 788 aa18.86■□□□□ 0.61
VCP-202ENST00000417448 E2F8A0AVK6 867 aa18.86■□□□□ 0.61
VCP-202ENST00000417448 GOLGA8CPA6NN73 597 aa18.86■□□□□ 0.61
VCP-202ENST00000417448 F8VP50 259 aa18.86■□□□□ 0.61
VCP-202ENST00000417448 ATXN7O15265 892 aaPredicted RBP18.86■□□□□ 0.61
VCP-202ENST00000417448 PMM2O15305 246 aa18.86■□□□□ 0.61
VCP-202ENST00000417448 CILPO75339 1184 aa18.86■□□□□ 0.61
VCP-202ENST00000417448 LETM1O95202 739 aaPredicted RBP18.86■□□□□ 0.61
VCP-202ENST00000417448 ZNF883P0CG24 379 aa18.86■□□□□ 0.61
VCP-202ENST00000417448 ATP1A3P13637 1013 aa18.86■□□□□ 0.61
VCP-202ENST00000417448 ITPKBP27987 946 aa18.86■□□□□ 0.61
VCP-202ENST00000417448 ADORA2BP29275 332 aa18.86■□□□□ 0.61
VCP-202ENST00000417448 INCA1Q0VD86 236 aa18.86■□□□□ 0.61
VCP-202ENST00000417448 WDR45BQ5MNZ6 344 aa18.86■□□□□ 0.61
VCP-202ENST00000417448 TMEM25Q86YD3 366 aa18.86■□□□□ 0.61
VCP-202ENST00000417448 BBS7Q8IWZ6 715 aa18.86■□□□□ 0.61
VCP-202ENST00000417448 CHPFQ8IZ52 775 aa18.86■□□□□ 0.61
VCP-202ENST00000417448 DNASE2BQ8WZ79 361 aa18.86■□□□□ 0.61
VCP-202ENST00000417448 KREMEN1Q96MU8 473 aa18.86■□□□□ 0.61
VCP-202ENST00000417448 AJAP1Q9UKB5 411 aaPredicted RBP18.86■□□□□ 0.61
VCP-202ENST00000417448 BTBD3Q9Y2F9 522 aa18.86■□□□□ 0.61
VCP-202ENST00000417448 KNTC1P50748 2209 aa18.85■□□□□ 0.61
VCP-202ENST00000417448 HECTD1Q9ULT8 2610 aa18.85■□□□□ 0.61
VCP-202ENST00000417448 RNF225M0QZC1 329 aaPredicted RBP18.85■□□□□ 0.61
VCP-202ENST00000417448 P4HA2O15460 535 aa18.85■□□□□ 0.61
VCP-202ENST00000417448 ANXA13P27216 316 aa18.85■□□□□ 0.61
VCP-202ENST00000417448 PPP3CCP48454 512 aa18.85■□□□□ 0.61
VCP-202ENST00000417448 ZNF165P49910 485 aa18.85■□□□□ 0.61
VCP-202ENST00000417448 RAD23BP54727 409 aa18.85■□□□□ 0.61
VCP-202ENST00000417448 CETN1Q12798 172 aa18.85■□□□□ 0.61
VCP-202ENST00000417448 ANO4Q32M45 955 aa18.85■□□□□ 0.61
VCP-202ENST00000417448 BTBD8Q5XKL5 378 aa18.85■□□□□ 0.61
VCP-202ENST00000417448 GBP6Q6ZN66 633 aa18.85■□□□□ 0.61
VCP-202ENST00000417448 DDX42Q86XP3 938 aaKnown RBP eCLIP18.85■□□□□ 0.61
VCP-202ENST00000417448 SLC4A11Q8NBS3 891 aa18.85■□□□□ 0.61
VCP-202ENST00000417448 OTUB2Q96DC9 234 aa18.85■□□□□ 0.61
VCP-202ENST00000417448 HEXIM2Q96MH2 286 aaKnown RBP18.85■□□□□ 0.61
VCP-202ENST00000417448 NT5C1AQ9BXI3 368 aa18.85■□□□□ 0.61
VCP-202ENST00000417448 CBX8Q9HC52 389 aa18.85■□□□□ 0.61
VCP-202ENST00000417448 UBE2TQ9NPD8 197 aaPredicted RBP18.85■□□□□ 0.61
VCP-202ENST00000417448 SPHK2Q9NRA0 654 aa18.85■□□□□ 0.61
VCP-202ENST00000417448 MEI4A8MW99 385 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 PRRT4C9JH25 899 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 COCHO43405 550 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 CDK11BP21127 795 aaKnown RBP18.84■□□□□ 0.61
VCP-202ENST00000417448 EEF1GP26641 437 aaKnown RBP18.84■□□□□ 0.61
VCP-202ENST00000417448 PON1P27169 355 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 CD6P30203 668 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 KLK7P49862 253 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 KCNMA1Q12791 1236 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 IQCB1Q15051 598 aa18.84■□□□□ 0.61
VCP-202ENST00000417448 HLA-BQ31612 363 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms