RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 ZFXP17010 805 aaPredicted RBP11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 STIP1P31948 543 aaKnown RBP11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 MAGEA4P43358 317 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 LMAN1P49257 510 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 TPI1P60174 286 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 PDIA2Q13087 525 aaKnown RBP11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 MORF4L2Q15014 288 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 LONRF1Q17RB8 773 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 ARL13BQ3SXY8 428 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 RFX8Q6ZV50 586 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 TRMT10CQ7L0Y3 403 aaKnown RBP11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 VSIG1Q86XK7 387 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 PPIL6Q8IXY8 311 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 CCNYQ8ND76 341 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 GIPC2Q8TF65 315 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 TRIM43Q96BQ3 446 aaPredicted RBP11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 TMEM175Q9BSA9 504 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 RAB6BQ9NRW1 208 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 ABCC13Q9NSE7 274 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 GMIPQ9P107 970 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 NOVA2Q9UNW9 492 aaKnown RBP11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 VGLL3A8MV65 326 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 TRIM66O15016 1216 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 TMEM63AO94886 807 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 VNN2O95498 520 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 TTC4O95801 387 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 MOCS2O96007 188 aaPredicted RBP11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 F9P00740 461 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 ERCC2P18074 760 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 CXCR3P49682 368 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 AP1B1Q10567 949 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 FNBP1LQ5T0N5 605 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 VSTM1Q6UX27 236 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 PSTKQ8IV42 348 aaKnown RBP11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 CCDC13Q8IYE1 715 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 ZBED8Q8IZ13 594 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 PGAP3Q96FM1 320 aaPredicted RBP11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 FUBP3Q96I24 572 aaKnown RBP eCLIP11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 TSPYL1Q9H0U9 437 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 CWH43Q9H720 699 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 RRN3Q9NYV6 651 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 SEPT10Q9P0V9 454 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 OR12D3Q9UGF7 316 aa11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 XPO7Q9UIA9 1087 aaKnown RBP11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 MAGED2Q9UNF1 606 aaPredicted RBP11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 FARP1Q9Y4F1 1045 aaPredicted RBP11.04□□□□□ -0.64
SMPD4P1-201ENST00000416717 PLXNA3P51805 1871 aa11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 ZNF487B1APH4 448 aa11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 HSPA8P11142 646 aaKnown RBP11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 VAV1P15498 845 aa11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 RAG1P15918 1043 aa11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 OR1D2P34982 312 aa11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 EIF3BP55884 814 aaKnown RBP11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 ELAVL2Q12926 359 aaKnown RBP11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 MSS51Q4VC12 460 aa11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 SLC45A4Q5BKX6 768 aa11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 SPDYCQ5MJ68 293 aa11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 C1orf53Q5VUE5 145 aa11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 KIAA1841Q6NSI8 718 aa11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 ANKS3Q6ZW76 656 aa11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 CDKL3Q8IVW4 592 aaPredicted RBP11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 NAT8LQ8N9F0 302 aa11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 FBXO22Q8NEZ5 403 aa11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 NTAN1Q96AB6 310 aa11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 SLC9A7Q96T83 725 aa11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 VN1R3Q9BXE9 311 aa11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 SHOC2Q9UQ13 582 aa11.03□□□□□ -0.64
SMPD4P1-201ENST00000416717 BCLAF3A2AJT9 711 aaKnown RBP11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 IRAK2O43187 625 aa11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 TBX18O95935 607 aa11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 EPHB2P29323 1055 aa11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 NR2C2P49116 596 aa11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 GPR17Q13304 367 aa11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 DPYSQ14117 519 aa11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 HIF1AQ16665 826 aa11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 HEATR6Q6AI08 1181 aaKnown RBP11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 RWDD4Q6NW29 188 aaKnown RBP11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 DENND5BQ6ZUT9 1274 aa11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 ZNF771Q7L3S4 317 aaPredicted RBP11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 OTOP2Q7RTS6 562 aa11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 PCGF5Q86SE9 256 aa11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 SCML4Q8N228 414 aa11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 DEPDC1BQ8WUY9 529 aa11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 TFB1MQ8WVM0 346 aaKnown RBP11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 FBXO32Q969P5 355 aa11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 C8orf48Q96LL4 319 aa11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 RCOR3Q9P2K3 495 aaPredicted RBP11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 CTNNAL1Q9UBT7 734 aa11.02□□□□□ -0.64
SMPD4P1-201ENST00000416717 LTBP2Q14767 1821 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 COL4A6Q14031 1691 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 WDR27A2RRH5 827 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 FOXO6A8MYZ6 492 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 HMGB1P1B2RPK0 211 aaPredicted RBP11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 H7C4K7 107 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 RASGRF2O14827 1237 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 AVILO75366 819 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 LRIG2O94898 1065 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 NR1D1P20393 614 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 YWHAQP27348 245 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 MAGOHP61326 146 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms