RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 SRSF6Q13247 344 aaKnown RBP9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 LBRQ14739 615 aaKnown RBP9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 GEN1Q17RS7 908 aa9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 SV2CQ496J9 727 aa9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 BMP2KLQ5H9B9 411 aa9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 SDE2Q6IQ49 451 aa9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 LINC00114Q6XXX2 140 aa9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 SCAMP5Q8TAC9 235 aa9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 SAP25Q8TEE9 199 aa9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 SCFD1Q8WVM8 642 aa9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 SPATA17Q96L03 361 aa9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 SLC6A18Q96N87 628 aa9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 FIZ1Q96SL8 496 aa9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 SYT15Q9BQS2 421 aa9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 PDRG1Q9NUG6 133 aa9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 MAGEC2Q9UBF1 373 aaPredicted RBP9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 SIX4Q9UIU6 781 aa9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 DNM3Q9UQ16 869 aa9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 PCDHGA1Q9Y5H4 931 aa9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 SNX9Q9Y5X1 595 aa9.16□□□□□ -0.94
NIF3L1-206ENST00000416651 CKAP5Q14008 2032 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 ABCA12Q86UK0 2595 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 MDM4O15151 490 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 CACNG3O60359 315 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 CDC45O75419 566 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 FSBPO95073 299 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 PIGRP01833 764 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 IGHV4-34P06331 123 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 GP1BBP13224 206 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 ITGB6P18564 788 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 MUTP22033 750 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 AMPD1P23109 780 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 GUCY2CP25092 1073 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 PSMA5P28066 241 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 TFAMQ00059 246 aaKnown RBP9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 MYL7Q01449 175 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 MDH1BQ5I0G3 518 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 TMEM215Q68D42 235 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 GOLGA6L1Q8N7Z2 621 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 ZNF248Q8NDW4 579 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 PCED1BQ96HM7 432 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 BBS2Q9BXC9 721 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 ZNF518BQ9C0D4 1074 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 DPEP3Q9H4B8 488 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 MTG2Q9H4K7 406 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 GPAMQ9HCL2 828 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 TBC1D14Q9P2M4 693 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 THAP10Q9P2Z0 257 aaPredicted RBP9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 DERAQ9Y315 318 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 SH3BP1Q9Y3L3 701 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 C2CD2Q9Y426 696 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 PCDHB6Q9Y5E3 794 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 CYP46A1Q9Y6A2 500 aa9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 TLN1Q9Y490 2541 aaKnown RBP9.15□□□□□ -0.94
NIF3L1-206ENST00000416651 CREBBPQ92793 2442 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 PTPRJQ12913 1337 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 MYH10P35580 1976 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 PAPSS1O43252 624 aaPredicted RBP9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 TSPAN3O60637 253 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 HUS1O60921 280 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 MT-CO3P00414 261 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 IGLV3-19P01714 112 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 NTRK1P04629 796 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 HOXB4P17483 251 aaPredicted RBP9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 GRIA4P48058 902 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 DGKGP49619 791 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 SLC12A3P55017 1021 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 PCBP4P57723 403 aaKnown RBP9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 UBAP2LQ14157 1087 aaKnown RBP9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 ZNF234Q14588 700 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 TTC38Q5R3I4 469 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 HAUS3Q68CZ6 603 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 KANSL1Q7Z3B3 1105 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 CD163Q86VB7 1156 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 CD302Q8IX05 232 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 DHX40Q8IX18 779 aaKnown RBP9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 DCBLD1Q8N8Z6 715 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 IGSF22Q8N9C0 903 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 RBBP8NLQ8NC74 664 aaPredicted RBP9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 NSUN7Q8NE18 718 aaKnown RBP9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 SNRNP27Q8WVK2 155 aaKnown RBP9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 KCNE4Q8WWG9 221 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 FUBP3Q96I24 572 aaKnown RBP eCLIP9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 VCPIP1Q96JH7 1222 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 KCNK16Q96T55 309 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 MRPL45Q9BRJ2 306 aaKnown RBP9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 NUP58Q9BVL2 599 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 ASB7Q9H672 318 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 ASCL3Q9NQ33 180 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 NUDT5Q9UKK9 219 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 DOLKQ9UPQ8 538 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 CLCA2Q9UQC9 943 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 NBASA2RRP1 2371 aa9.14□□□□□ -0.95
NIF3L1-206ENST00000416651 DOPEY1Q5JWR5 2465 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 KIF26BQ2KJY2 2108 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 GOLGA8IPA6NC78 632 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 GOLGA8JA6NMD2 632 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 K7ENM7 598 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 GFRA2O00451 464 aa9.13□□□□□ -0.95
NIF3L1-206ENST00000416651 TRIM38O00635 465 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms