RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 DNTTP04053 509 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 NR3C1P04150 777 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 HLA-EP13747 358 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 GRIA4P48058 902 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 SLC8A3P57103 927 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 KIF19Q2TAC6 998 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 TTC31Q49AM3 519 aaPredicted RBP10.5□□□□□ -0.73
MDC1-202ENST00000416571 FNDC3BQ53EP0 1204 aaKnown RBP10.5□□□□□ -0.73
MDC1-202ENST00000416571 MPPE1Q53F39 396 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 DBX2Q6ZNG2 339 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 SCD5Q86SK9 330 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 SLC9A9Q8IVB4 645 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 SCUBE3Q8IX30 993 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 CPXM2Q8N436 756 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 PDCD7Q8N8D1 485 aaKnown RBP10.5□□□□□ -0.73
MDC1-202ENST00000416571 SORCS1Q8WY21 1168 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 PIWIL1Q96J94 861 aaKnown RBP10.5□□□□□ -0.73
MDC1-202ENST00000416571 DCBLD2Q96PD2 775 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 DUSP16Q9BY84 665 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 BACH2Q9BYV9 841 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 NIF3L1Q9GZT8 377 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 BTBD1Q9H0C5 482 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 C6orf106Q9H6K1 298 aaPredicted RBP10.5□□□□□ -0.73
MDC1-202ENST00000416571 TOR4AQ9NXH8 423 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 PLA2G4CQ9UP65 541 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 BTBD3Q9Y2F9 522 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 ANKRD6Q9Y2G4 727 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 SNX11Q9Y5W9 270 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 USP3Q9Y6I4 520 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 APC2O95996 2303 aa10.5□□□□□ -0.73
MDC1-202ENST00000416571 MYO18BQ8IUG5 2567 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 FAM149AA5PLN7 773 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 CALUO43852 315 aaPredicted RBP10.49□□□□□ -0.73
MDC1-202ENST00000416571 DKK1O94907 266 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 FSBPO95073 299 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 SEMA4FO95754 770 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 KRT13P13646 458 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 ACSL1P33121 698 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 ABCG1P45844 678 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 ME1P48163 572 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 HARS2P49590 506 aaKnown RBP10.49□□□□□ -0.73
MDC1-202ENST00000416571 VAMP7P51809 220 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 BCAT1P54687 386 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 ZNF445P59923 1031 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 YWHAGP61981 247 aaKnown RBP eCLIP10.49□□□□□ -0.73
MDC1-202ENST00000416571 CAMK2GQ13555 558 aaPredicted RBP10.49□□□□□ -0.73
MDC1-202ENST00000416571 ZNF394Q53GI3 561 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 PPP1R26Q5T8A7 1209 aaPredicted RBP10.49□□□□□ -0.73
MDC1-202ENST00000416571 MARCH9Q86YJ5 346 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 C1orf216Q8TAB5 229 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 WFIKKN2Q8TEU8 576 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 IGSF8Q969P0 613 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 PLD4Q96BZ4 506 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 P2RY11Q96G91 374 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 HEXIM2Q96MH2 286 aaKnown RBP10.49□□□□□ -0.73
MDC1-202ENST00000416571 BBC3Q96PG8 261 aaPredicted RBP10.49□□□□□ -0.73
MDC1-202ENST00000416571 MMRN2Q9H8L6 949 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 FBRSQ9HAH7 460 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 TM9SF3Q9HD45 589 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 OSGEPQ9NPF4 335 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 DMAC2Q9NW81 257 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 FTSJ1Q9UET6 329 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 CLEC4EQ9ULY5 219 aa10.49□□□□□ -0.73
MDC1-202ENST00000416571 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.49□□□□□ -0.73
MDC1-202ENST00000416571 LAMA5O15230 3695 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 TP53BP1Q12888 1972 aaPredicted RBP10.48□□□□□ -0.73
MDC1-202ENST00000416571 URB1O60287 2271 aaKnown RBP10.48□□□□□ -0.73
MDC1-202ENST00000416571 E9PAM4 449 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 PCDHGA12O60330 932 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 DFNA5O60443 496 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 TSPAN3O60637 253 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 CD27P26842 260 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 HNF1BP35680 557 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 GCLMP48507 274 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 C21orf59P57076 290 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 ZBTB16Q05516 673 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 STK4Q13043 487 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 SMAD1Q15797 465 aaKnown RBP10.48□□□□□ -0.73
MDC1-202ENST00000416571 FOXD4L6Q3SYB3 417 aaPredicted RBP10.48□□□□□ -0.73
MDC1-202ENST00000416571 DHRS13Q6UX07 377 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 FOXD4L3Q6VB84 417 aaPredicted RBP10.48□□□□□ -0.73
MDC1-202ENST00000416571 INTS8Q75QN2 995 aaKnown RBP10.48□□□□□ -0.73
MDC1-202ENST00000416571 CHST9Q7L1S5 443 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 GRAMD1CQ8IYS0 662 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 AHI1Q8N157 1196 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 TTC39CQ8N584 583 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 ZNF366Q8N895 744 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 KIAA0895Q8NCT3 520 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 TAS1R2Q8TE23 839 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 GANCQ8TET4 914 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 CYB5D2Q8WUJ1 264 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 TMEM174Q8WUU8 243 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 GOLGA1Q92805 767 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 SKA1Q96BD8 255 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 BIRC7Q96CA5 298 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 NXPE2Q96DL1 559 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 ARID3AQ99856 593 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 SGK2Q9HBY8 427 aa10.48□□□□□ -0.73
MDC1-202ENST00000416571 OLA1Q9NTK5 396 aaKnown RBP10.48□□□□□ -0.73
MDC1-202ENST00000416571 NCKAP1Q9Y2A7 1128 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms