RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 ZPBP2Q6X784 338 aa11.93□□□□□ -0.5
SCN4B-202ENST00000415030 TSHZ1Q6ZSZ6 1077 aa11.93□□□□□ -0.5
SCN4B-202ENST00000415030 GPR141Q7Z602 305 aa11.93□□□□□ -0.5
SCN4B-202ENST00000415030 TREML1Q86YW5 311 aa11.93□□□□□ -0.5
SCN4B-202ENST00000415030 MCUQ8NE86 351 aa11.93□□□□□ -0.5
SCN4B-202ENST00000415030 RIN3Q8TB24 985 aa11.93□□□□□ -0.5
SCN4B-202ENST00000415030 TSPYL2Q9H2G4 693 aaPredicted RBP11.93□□□□□ -0.5
SCN4B-202ENST00000415030 PCDHGC3Q9UN70 934 aa11.93□□□□□ -0.5
SCN4B-202ENST00000415030 GMEB1Q9Y692 573 aa11.93□□□□□ -0.5
SCN4B-202ENST00000415030 CAPN8A6NHC0 703 aa11.93□□□□□ -0.5
SCN4B-202ENST00000415030 GMNNO75496 209 aa11.93□□□□□ -0.5
SCN4B-202ENST00000415030 ASLP04424 464 aa11.93□□□□□ -0.5
SCN4B-202ENST00000415030 RBL1P28749 1068 aa11.93□□□□□ -0.5
SCN4B-202ENST00000415030 PRKAA2P54646 552 aa11.93□□□□□ -0.5
SCN4B-202ENST00000415030 SNAPC2Q13487 334 aa11.93□□□□□ -0.5
SCN4B-202ENST00000415030 METTL21CQ5VZV1 264 aa11.93□□□□□ -0.5
SCN4B-202ENST00000415030 ARMC3Q5W041 872 aa11.93□□□□□ -0.5
SCN4B-202ENST00000415030 PGBD4Q96DM1 585 aa11.93□□□□□ -0.5
SCN4B-202ENST00000415030 DHRS4Q9BTZ2 278 aa11.93□□□□□ -0.5
SCN4B-202ENST00000415030 C20orf96Q9NUD7 363 aaPredicted RBP11.93□□□□□ -0.5
SCN4B-202ENST00000415030 SIRPGQ9P1W8 387 aa11.93□□□□□ -0.5
SCN4B-202ENST00000415030 KLHL8Q9P2G9 620 aaPredicted RBP11.93□□□□□ -0.5
SCN4B-202ENST00000415030 VDRP11473 427 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 HIRAP54198 1017 aaPredicted RBP11.92□□□□□ -0.5
SCN4B-202ENST00000415030 STX5Q13190 355 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 INSCQ1MX18 579 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 C16orf46Q6P387 395 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 TERB1Q8NA31 727 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 TDRD5Q8NAT2 981 aaKnown RBP11.92□□□□□ -0.5
SCN4B-202ENST00000415030 IL31RAQ8NI17 732 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 RXFP2Q8WXD0 754 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 RNF157Q96PX1 679 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 RPAP3Q9H6T3 665 aaPredicted RBP11.92□□□□□ -0.5
SCN4B-202ENST00000415030 ARHGAP28Q9P2N2 729 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 AP4S1Q9Y587 144 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 TP73O15350 636 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 TRIM13O60858 407 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 MRPS22P82650 360 aaKnown RBP11.92□□□□□ -0.5
SCN4B-202ENST00000415030 PTPN11Q06124 597 aaPredicted RBP11.92□□□□□ -0.5
SCN4B-202ENST00000415030 CDRT15Q96T59 188 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 LHX5Q9H2C1 402 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 ZDHHC7Q9NXF8 308 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 MYRFQ9Y2G1 1151 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 TEX264Q9Y6I9 313 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 CYB561D2O14569 222 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 MAP3K13O43283 966 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 RNASEH1O60930 286 aaKnown RBP11.92□□□□□ -0.5
SCN4B-202ENST00000415030 CSPG5O95196 566 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 ESRRBO95718 433 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 ACO1P21399 889 aaKnown RBP11.92□□□□□ -0.5
SCN4B-202ENST00000415030 MXD4Q14582 209 aaPredicted RBP11.92□□□□□ -0.5
SCN4B-202ENST00000415030 RPS6KA2Q15349 733 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 ZNF280CQ8ND82 737 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 BSNDQ8WZ55 320 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 MKS1Q9NXB0 559 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 NSMCE4AQ9NXX6 385 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 KIAA1257Q9ULG3 409 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 RNF103-CHMP3A0A140T963 221 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 RGSL1A5PLK6 1076 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 AVILO75366 819 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 CSDE1O75534 798 aaKnown RBP11.92□□□□□ -0.5
SCN4B-202ENST00000415030 FAM155BO75949 473 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 SUPT20HL2P0C7V6 817 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 ETV4P43268 484 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 GRTP1Q5TC63 336 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 DENND1BQ6P3S1 775 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 UNC5AQ6ZN44 842 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 TRIM74Q86UV6 250 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 TRIM73Q86UV7 250 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 SNX32Q86XE0 403 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 ZNF354CQ86Y25 554 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 HPS6Q86YV9 775 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 AHI1Q8N157 1196 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 SYT17Q9BSW7 474 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 CCDC106Q9BWC9 280 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 COPS7BQ9H9Q2 264 aaPredicted RBP11.92□□□□□ -0.5
SCN4B-202ENST00000415030 APOBEC3GQ9HC16 384 aaKnown RBP11.92□□□□□ -0.5
SCN4B-202ENST00000415030 VTI1BQ9UEU0 232 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 RSL24D1Q9UHA3 163 aaKnown RBP11.92□□□□□ -0.5
SCN4B-202ENST00000415030 AKT3Q9Y243 479 aa11.92□□□□□ -0.5
SCN4B-202ENST00000415030 TRPC5OSA6NMA1 111 aa11.91□□□□□ -0.5
SCN4B-202ENST00000415030 TPP1O14773 563 aa11.91□□□□□ -0.5
SCN4B-202ENST00000415030 PGAM1P18669 254 aa11.91□□□□□ -0.5
SCN4B-202ENST00000415030 CCNFP41002 786 aa11.91□□□□□ -0.5
SCN4B-202ENST00000415030 ZNF143P52747 638 aaPredicted RBP11.91□□□□□ -0.5
SCN4B-202ENST00000415030 ZBTB17Q13105 803 aa11.91□□□□□ -0.5
SCN4B-202ENST00000415030 SEZ6Q53EL9 994 aa11.91□□□□□ -0.5
SCN4B-202ENST00000415030 CCDC92Q53HC0 331 aaPredicted RBP11.91□□□□□ -0.5
SCN4B-202ENST00000415030 NPNTQ6UXI9 565 aa11.91□□□□□ -0.5
SCN4B-202ENST00000415030 PATL1Q86TB9 770 aaKnown RBP11.91□□□□□ -0.5
SCN4B-202ENST00000415030 SIAH1Q8IUQ4 282 aa11.91□□□□□ -0.5
SCN4B-202ENST00000415030 OR5B17Q8NGF7 314 aa11.91□□□□□ -0.5
SCN4B-202ENST00000415030 RP9Q8TA86 221 aaKnown RBP11.91□□□□□ -0.5
SCN4B-202ENST00000415030 PDCD6IPQ8WUM4 868 aaKnown RBP11.91□□□□□ -0.5
SCN4B-202ENST00000415030 TFB1MQ8WVM0 346 aaKnown RBP11.91□□□□□ -0.5
SCN4B-202ENST00000415030 RMND5BQ96G75 393 aaPredicted RBP11.91□□□□□ -0.5
SCN4B-202ENST00000415030 ZBTB45Q96K62 511 aaPredicted RBP11.91□□□□□ -0.5
SCN4B-202ENST00000415030 TMEM134Q9H6X4 195 aa11.91□□□□□ -0.5
SCN4B-202ENST00000415030 KCNK13Q9HB14 408 aa11.91□□□□□ -0.5
SCN4B-202ENST00000415030 TIMM44O43615 452 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms