RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 FTCDO95954 541 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 KRT7P08729 469 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 PRLRP16471 622 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 DESP17661 470 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 MARCKSL1P49006 195 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 KCNQ1P51787 676 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 MLLT6P55198 1093 aaPredicted RBP13.79□□□□□ -0.2
CNN3-203ENST00000415017 GNG11P61952 73 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 USP4Q13107 963 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 NME3Q13232 169 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 SMAD4Q13485 552 aaKnown RBP13.79□□□□□ -0.2
CNN3-203ENST00000415017 CBX2Q14781 532 aaPredicted RBP13.79□□□□□ -0.2
CNN3-203ENST00000415017 ZNF77Q15935 545 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 DPYSL2Q16555 572 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 LEXMQ3ZCV2 418 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 C5orf22Q49AR2 442 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 MANEALQ5VSG8 457 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 PAPD7Q5XG87 772 aaKnown RBP13.79□□□□□ -0.2
CNN3-203ENST00000415017 NUGGCQ68CJ6 796 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 MIB1Q86YT6 1006 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 UNC45BQ8IWX7 931 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 ZNF683Q8IZ20 524 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 RIN3Q8TB24 985 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 TSC1Q92574 1164 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 HLA-CQ95604 372 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 MYADMQ96S97 322 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 PRMT1Q99873 361 aaKnown RBP13.79□□□□□ -0.2
CNN3-203ENST00000415017 SNRNP25Q9BV90 132 aaKnown RBP13.79□□□□□ -0.2
CNN3-203ENST00000415017 KIF9Q9HAQ2 790 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 TRPC7Q9HCX4 862 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 TDP1Q9NUW8 608 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 OBP2AQ9NY56 170 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 USTQ9Y2C2 406 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 CPQQ9Y646 472 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 COL6A3P12111 3177 aa13.79□□□□□ -0.2
CNN3-203ENST00000415017 E2F8A0AVK6 867 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 SPOPO43791 374 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 PRPSAP2O60256 369 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 PAGE1O75459 146 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 CKMP06732 381 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 MBL2P11226 248 aaPredicted RBP13.78□□□□□ -0.2
CNN3-203ENST00000415017 LAMP2P13473 410 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 IL4RP24394 825 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 MSNP26038 577 aaKnown RBP13.78□□□□□ -0.2
CNN3-203ENST00000415017 L1CAMP32004 1257 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 AMPD2Q01433 879 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 CCDC85BQ15834 202 aaPredicted RBP13.78□□□□□ -0.2
CNN3-203ENST00000415017 HADHQ16836 314 aaKnown RBP13.78□□□□□ -0.2
CNN3-203ENST00000415017 ATP13A4Q4VNC1 1196 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 FAM78AQ5JUQ0 283 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 DCAF12L1Q5VU92 463 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 RNF43Q68DV7 783 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 SND1Q7KZF4 910 aaKnown RBP eCLIP13.78□□□□□ -0.2
CNN3-203ENST00000415017 DDX42Q86XP3 938 aaKnown RBP eCLIP13.78□□□□□ -0.2
CNN3-203ENST00000415017 ARID3BQ8IVW6 561 aaPredicted RBP13.78□□□□□ -0.2
CNN3-203ENST00000415017 ING5Q8WYH8 240 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 SMARCD2Q92925 531 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 FAF2Q96CS3 445 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 RSPRY1Q96DX4 576 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 BTN2A3PQ96KV6 586 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 LRRC3BQ96PB8 259 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 MAGEB5Q9BZ81 275 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 DCLK3Q9C098 648 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 TKTL2Q9H0I9 626 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 TMPRSS4Q9NRS4 437 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 EPS15L1Q9UBC2 864 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 PCSK1NQ9UHG2 260 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 NEU3Q9UQ49 428 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 CCL26Q9Y258 94 aa13.78□□□□□ -0.2
CNN3-203ENST00000415017 IGLV3-10A0A075B6K4 115 aa13.77□□□□□ -0.21
CNN3-203ENST00000415017 H3BQ06 376 aaPredicted RBP13.77□□□□□ -0.21
CNN3-203ENST00000415017 KIF2AO00139 706 aaPredicted RBP13.77□□□□□ -0.21
CNN3-203ENST00000415017 LEFTY2O00292 366 aa13.77□□□□□ -0.21
CNN3-203ENST00000415017 ATP1A1P05023 1023 aaKnown RBP13.77□□□□□ -0.21
CNN3-203ENST00000415017 COL4A2P08572 1712 aa13.77□□□□□ -0.21
CNN3-203ENST00000415017 KCNA5P22460 613 aa13.77□□□□□ -0.21
CNN3-203ENST00000415017 HOXC13P31276 330 aa13.77□□□□□ -0.21
CNN3-203ENST00000415017 PTPN7P35236 360 aa13.77□□□□□ -0.21
CNN3-203ENST00000415017 AVPR1AP37288 418 aa13.77□□□□□ -0.21
CNN3-203ENST00000415017 HCAR3P49019 387 aa13.77□□□□□ -0.21
CNN3-203ENST00000415017 ZNF135P52742 658 aaPredicted RBP13.77□□□□□ -0.21
CNN3-203ENST00000415017 SMAD2Q15796 467 aaKnown RBP13.77□□□□□ -0.21
CNN3-203ENST00000415017 CA9Q16790 459 aa13.77□□□□□ -0.21
CNN3-203ENST00000415017 ARL13BQ3SXY8 428 aa13.77□□□□□ -0.21
CNN3-203ENST00000415017 FAM133BQ5BKY9 247 aaKnown RBP13.77□□□□□ -0.21
CNN3-203ENST00000415017 PIK3R6Q5UE93 754 aa13.77□□□□□ -0.21
CNN3-203ENST00000415017 NADSYN1Q6IA69 706 aa13.77□□□□□ -0.21
CNN3-203ENST00000415017 CELF5Q8N6W0 485 aaKnown RBP13.77□□□□□ -0.21
CNN3-203ENST00000415017 EXD1Q8NHP7 514 aa13.77□□□□□ -0.21
CNN3-203ENST00000415017 ZSCAN18Q8TBC5 510 aaPredicted RBP13.77□□□□□ -0.21
CNN3-203ENST00000415017 SH3RF2Q8TEC5 729 aa13.77□□□□□ -0.21
CNN3-203ENST00000415017 CARD9Q9H257 536 aa13.77□□□□□ -0.21
CNN3-203ENST00000415017 DDX56Q9NY93 547 aaKnown RBP13.77□□□□□ -0.21
CNN3-203ENST00000415017 MYOFQ9NZM1 2061 aa13.77□□□□□ -0.21
CNN3-203ENST00000415017 RCOR3Q9P2K3 495 aaPredicted RBP13.77□□□□□ -0.21
CNN3-203ENST00000415017 XPO7Q9UIA9 1087 aaKnown RBP13.77□□□□□ -0.21
CNN3-203ENST00000415017 AGO1Q9UL18 857 aaKnown RBP13.77□□□□□ -0.21
CNN3-203ENST00000415017 PACSIN2Q9UNF0 486 aaPredicted RBP13.77□□□□□ -0.21
CNN3-203ENST00000415017 AP4E1Q9UPM8 1137 aa13.77□□□□□ -0.21
CNN3-203ENST00000415017 UNC80Q8N2C7 3258 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms