RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 WHRNQ9P202 907 aa11.71□□□□□ -0.53
LINC00330-201ENST00000414562 AP4E1Q9UPM8 1137 aa11.71□□□□□ -0.53
LINC00330-201ENST00000414562 DRG1Q9Y295 367 aaKnown RBP11.71□□□□□ -0.53
LINC00330-201ENST00000414562 PCDHB5Q9Y5E4 795 aa11.71□□□□□ -0.53
LINC00330-201ENST00000414562 YJEFN3A6XGL0 299 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 E7ENQ6 273 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 M0QYT0 321 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 SGK1O00141 431 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 LTFP02788 710 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 ITIH2P19823 946 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 ATXN1P54253 815 aaKnown RBP11.7□□□□□ -0.54
LINC00330-201ENST00000414562 NME3Q13232 169 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 HFE2Q6ZVN8 426 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 FAM131BQ86XD5 332 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 SCN4BQ8IWT1 228 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 GPR65Q8IYL9 337 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 CCHCR1Q8TD31 782 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 MICAL1Q8TDZ2 1067 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 SLC22A17Q8WUG5 538 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 UBLCP1Q8WVY7 318 aaPredicted RBP11.7□□□□□ -0.54
LINC00330-201ENST00000414562 NKD2Q969F2 451 aaPredicted RBP11.7□□□□□ -0.54
LINC00330-201ENST00000414562 SLC2A13Q96QE2 648 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 ADAM33Q9BZ11 813 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 FAM129AQ9BZQ8 928 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 PCDH18Q9HCL0 1135 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 MED4Q9NPJ6 270 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 SAE1Q9UBE0 346 aaPredicted RBP11.7□□□□□ -0.54
LINC00330-201ENST00000414562 AFF4Q9UHB7 1163 aaKnown RBP11.7□□□□□ -0.54
LINC00330-201ENST00000414562 APOC4-APOC2K7ER74 178 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 MCF2LO15068 1137 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 POLR3GO15318 223 aaPredicted RBP11.7□□□□□ -0.54
LINC00330-201ENST00000414562 ENDOD1O94919 500 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 APOC2P02655 101 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 ITGAVP06756 1048 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 NCAM1P13591 858 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 HOXD11P31277 338 aaPredicted RBP11.7□□□□□ -0.54
LINC00330-201ENST00000414562 GGCXP38435 758 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 ARSEP51690 589 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 CLCN4P51793 760 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 EIF3EP60228 445 aaKnown RBP11.7□□□□□ -0.54
LINC00330-201ENST00000414562 DEUP1Q05D60 604 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 NFE2Q16621 373 aaPredicted RBP11.7□□□□□ -0.54
LINC00330-201ENST00000414562 CA9Q16790 459 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 ANKRD20A8PQ5CZ79 823 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 SYPL2Q5VXT5 272 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 C1orf228Q6PIY5 440 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 ZDHHC24Q6UX98 284 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 TMC3Q7Z5M5 1100 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 BBOF1Q8ND07 529 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 SLC7A14Q8TBB6 771 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 GIPC2Q8TF65 315 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 ART4Q93070 314 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 RNF157Q96PX1 679 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 PRDM12Q9H4Q4 367 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 ANAPC5Q9UJX4 755 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 NAALADL1Q9UQQ1 740 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 ATP8A1Q9Y2Q0 1164 aa11.7□□□□□ -0.54
LINC00330-201ENST00000414562 H3BQF6 201 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 APOL1O14791 398 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 OPA1O60313 960 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 IFNB1P01574 187 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 RDXP35241 583 aaKnown RBP11.69□□□□□ -0.54
LINC00330-201ENST00000414562 MAGEA11P43364 429 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 CAV1Q03135 178 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 IFRD2Q12894 506 aaPredicted RBP11.69□□□□□ -0.54
LINC00330-201ENST00000414562 KCNC3Q14003 757 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 CCDC25Q86WR0 208 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 ALLCQ8N6M5 410 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 CCDC185Q8N715 623 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 SLC35B2Q8TB61 432 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 RSAD2Q8WXG1 361 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 IRGQQ8WZA9 623 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 P3H4Q92791 437 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 FUBP3Q96I24 572 aaKnown RBP eCLIP11.69□□□□□ -0.54
LINC00330-201ENST00000414562 FAM161BQ96MY7 647 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 NPY6RQ99463 290 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 SEPT5Q99719 369 aaPredicted RBP11.69□□□□□ -0.54
LINC00330-201ENST00000414562 PAIP2Q9BPZ3 127 aaKnown RBP11.69□□□□□ -0.54
LINC00330-201ENST00000414562 ZNF670Q9BS34 389 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 TMEM121Q9BTD3 319 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 CYP4F11Q9HBI6 524 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 PNPLA8Q9NP80 782 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 FBXW11Q9UKB1 542 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 COL6A3P12111 3177 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 MYO16Q9Y6X6 1858 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 CARNS1A5YM72 827 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 RFPL2O75678 378 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 FYNP06241 537 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 HMGA1P17096 107 aaKnown RBP11.69□□□□□ -0.54
LINC00330-201ENST00000414562 KLRC2P26717 231 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 CALRP27797 417 aaKnown RBP11.69□□□□□ -0.54
LINC00330-201ENST00000414562 L1CAMP32004 1257 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 HSD17B3P37058 310 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 ITGA8P53708 1063 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 PITX1P78337 314 aaPredicted RBP11.69□□□□□ -0.54
LINC00330-201ENST00000414562 OASLQ15646 514 aaKnown RBP11.69□□□□□ -0.54
LINC00330-201ENST00000414562 DPYSL2Q16555 572 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 MGAT5BQ3V5L5 792 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 POTEHQ6S545 545 aa11.69□□□□□ -0.54
LINC00330-201ENST00000414562 NPNTQ6UXI9 565 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms