RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 ITGA8P53708 1063 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 PCSK7Q16549 785 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 BBS9Q3SYG4 887 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 PPP1R21Q6ZMI0 780 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 DNAJB7Q7Z6W7 309 aaPredicted RBP10.06□□□□□ -0.8
SMPD4-203ENST00000412570 CACUL1Q86Y37 369 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 KATNAL2Q8IYT4 538 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 PNPLA1Q8N8W4 532 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 TCEAL4Q96EI5 215 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 MYEOVQ96EZ4 313 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 CSPG4P5Q96PW8 444 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 RUFY1Q96T51 708 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 NKX2-4Q9H2Z4 354 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 TRANK1O15050 2925 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 E7EVH7 732 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 LRIG2O94898 1065 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 SOD2P04179 222 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 TYMPP19971 482 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 HPDP32754 393 aaPredicted RBP10.06□□□□□ -0.8
SMPD4-203ENST00000412570 ACTN2P35609 894 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 GABRB2P47870 512 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 TUBP50607 506 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 TBX4P57082 545 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 RPS24P62847 133 aaKnown RBP10.06□□□□□ -0.8
SMPD4-203ENST00000412570 POU5F1Q01860 360 aaKnown RBP10.06□□□□□ -0.8
SMPD4-203ENST00000412570 IFFO1Q0D2I5 559 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 GPR17Q13304 367 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 CCDC85BQ15834 202 aaPredicted RBP10.06□□□□□ -0.8
SMPD4-203ENST00000412570 CCDC38Q502W7 563 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 OTUD1Q5VV17 481 aaPredicted RBP10.06□□□□□ -0.8
SMPD4-203ENST00000412570 IZUMO3Q5VZ72 239 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 CES3Q6UWW8 571 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 CCNI2Q6ZMN8 369 aaPredicted RBP10.06□□□□□ -0.8
SMPD4-203ENST00000412570 SPNS2Q8IVW8 549 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 ANKRD7Q92527 254 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 DDX23Q9BUQ8 820 aaKnown RBP10.06□□□□□ -0.8
SMPD4-203ENST00000412570 RNF38Q9H0F5 515 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 ELAC1Q9H777 363 aaKnown RBP10.06□□□□□ -0.8
SMPD4-203ENST00000412570 CNGB3Q9NQW8 809 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 RAB6BQ9NRW1 208 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 TCRBV7S3A2A0A539 114 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 E2F8A0AVK6 867 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 LPXNO60711 386 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 GAS8O95995 478 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 L1CAMP32004 1257 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 ADRA1BP35368 520 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 TAP1Q03518 808 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 CASP8Q14790 479 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 SH2D3CQ8N5H7 860 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 ANAPC5Q9UJX4 755 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 MAD1L1Q9Y6D9 718 aa10.06□□□□□ -0.8
SMPD4-203ENST00000412570 COL4A6Q14031 1691 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 H7C4K7 107 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 SYN3O14994 580 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 MTA2O94776 668 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 PRLRP16471 622 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 LAG3P18627 525 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 GRIA1P42261 906 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 VEPH1Q14D04 833 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 NAT16Q8N8M0 369 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 ZNF461Q8TAF7 563 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 RNF157Q96PX1 679 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 HTATIP2Q9BUP3 242 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 LINC01553A4QN01 128 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 H0YGN5 161 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 GJB3O75712 270 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 CYP11A1P05108 521 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 ELAVL2Q12926 359 aaKnown RBP10.05□□□□□ -0.8
SMPD4-203ENST00000412570 FASTKD3Q14CZ7 662 aaKnown RBP10.05□□□□□ -0.8
SMPD4-203ENST00000412570 SIX1Q15475 284 aaPredicted RBP10.05□□□□□ -0.8
SMPD4-203ENST00000412570 KYNUQ16719 465 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 ANKRD22Q5VYY1 191 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 CYP4V2Q6ZWL3 525 aaPredicted RBP10.05□□□□□ -0.8
SMPD4-203ENST00000412570 PID1Q7Z2X4 250 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 ADGRD2Q7Z7M1 963 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 MMGT1Q8N4V1 131 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 PQLC3Q8N755 202 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 PLD5Q8N7P1 536 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 ANKLE1Q8NAG6 615 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 PDCD6IPQ8WUM4 868 aaKnown RBP10.05□□□□□ -0.8
SMPD4-203ENST00000412570 SLC28A3Q9HAS3 691 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 ZNF334Q9HCZ1 680 aaPredicted RBP10.05□□□□□ -0.8
SMPD4-203ENST00000412570 HCFC2Q9Y5Z7 792 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 A0A0U1RQS6 177 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 ARHGEF37A1IGU5 675 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 TPH1P17752 444 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 HDCP19113 662 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 IL4RP24394 825 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 NRIP1P48552 1158 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 SESN2P58004 480 aaPredicted RBP10.05□□□□□ -0.8
SMPD4-203ENST00000412570 SEMG2Q02383 582 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 SKIV2LQ15477 1246 aaKnown RBP10.05□□□□□ -0.8
SMPD4-203ENST00000412570 ARL13BQ3SXY8 428 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 PPP2R2DQ66LE6 453 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 LINGO4Q6UY18 593 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 GRASPQ7Z6J2 395 aaPredicted RBP10.05□□□□□ -0.8
SMPD4-203ENST00000412570 CCDC13Q8IYE1 715 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 LGI2Q8N0V4 545 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 NPWQ8N729 165 aa10.05□□□□□ -0.8
SMPD4-203ENST00000412570 GOLGA6L1Q8N7Z2 621 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms