RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 TGDSO95455 350 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 SNAP29O95721 258 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 DLATP10515 647 aaKnown RBP5.38□□□□□ -1.55
HERC4-205ENST00000412272 RARGP13631 454 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 ACAT1P24752 427 aaKnown RBP5.38□□□□□ -1.55
HERC4-205ENST00000412272 IL1RL1Q01638 556 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 DGKDQ16760 1214 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 HP1BP3Q5SSJ5 553 aaPredicted RBP5.38□□□□□ -1.55
HERC4-205ENST00000412272 ATAD3BQ5T9A4 648 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 CACHD1Q5VU97 1274 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 PM20D1Q6GTS8 502 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 KDELC1Q6UW63 502 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 SULF1Q8IWU6 871 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 CARFQ8N187 725 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 OR5H6Q8NGV6 325 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 DDX54Q8TDD1 881 aaKnown RBP5.38□□□□□ -1.55
HERC4-205ENST00000412272 KRT35Q92764 455 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 ISCA1Q9BUE6 129 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 BRIP1Q9BX63 1249 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 NEUROG2Q9H2A3 272 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 FOXP1Q9H334 677 aaPredicted RBP5.38□□□□□ -1.55
HERC4-205ENST00000412272 RC3H2Q9HBD1 1191 aaKnown RBP5.38□□□□□ -1.55
HERC4-205ENST00000412272 GPAMQ9HCL2 828 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 TUFT1Q9NNX1 390 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 OLFML3Q9NRN5 406 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 FGFR1OP2Q9NVK5 253 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 TXNDC16Q9P2K2 825 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 PPARGC1AQ9UBK2 798 aaKnown RBP5.38□□□□□ -1.55
HERC4-205ENST00000412272 ZNF69Q9UC07 566 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 ZNF112Q9UJU3 913 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 PTBP2Q9UKA9 531 aaKnown RBP5.38□□□□□ -1.55
HERC4-205ENST00000412272 MRPS7Q9Y2R9 242 aaKnown RBP5.38□□□□□ -1.55
HERC4-205ENST00000412272 CORINQ9Y5Q5 1042 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 PKD1L3Q7Z443 1732 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 USP6P35125 1406 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 FRMPD4Q14CM0 1322 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 HMX3A6NHT5 357 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 GOLGA8SH3BPF8 625 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 RIMBP2O15034 1052 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 PIP5K1CO60331 668 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 SCO1O75880 301 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 ALDH1A2O94788 518 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 CRTAMO95727 393 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 POLR3DP05423 398 aaPredicted RBP5.38□□□□□ -1.55
HERC4-205ENST00000412272 SYN1P17600 705 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 HLA-FP30511 346 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 RAP1GDS1P52306 607 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 AIF1P55008 147 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 GPLD1P80108 840 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 KRT17Q04695 432 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 DLG1Q12959 904 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 PAK1Q13153 545 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 SPA17Q15506 151 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 KYAT1Q16773 422 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 ILDR2Q71H61 639 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 LPCAT2Q7L5N7 544 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 TPH2Q8IWU9 490 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 BBS7Q8IWZ6 715 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 ZNF366Q8N895 744 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 PIK3C3Q8NEB9 887 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 OR6Y1Q8NGX8 325 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 XAGE3Q8WTP9 111 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 FERMT1Q9BQL6 677 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 EMILIN2Q9BXX0 1053 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 ARNT2Q9HBZ2 717 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 PLSCR2Q9NRY7 297 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 ZDHHC18Q9NUE0 388 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 THG1LQ9NWX6 298 aaKnown RBP5.38□□□□□ -1.55
HERC4-205ENST00000412272 LRWD1Q9UFC0 647 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.38□□□□□ -1.552e-12■■■■□ 19.7
HERC4-205ENST00000412272 CPQQ9Y646 472 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 TJP1Q07157 1748 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 HEATR9A2RTY3 570 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 B4E1Z4 1266 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 TM9SF1O15321 606 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 OR7A10O76100 309 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 SEMA3DO95025 777 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 RECKO95980 971 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 CFBP00751 764 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 CALB1P05937 261 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 GAP43P17677 238 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 TNFAIP3P21580 790 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 CDC25AP30304 524 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 RACK1P63244 317 aaKnown RBP5.38□□□□□ -1.55
HERC4-205ENST00000412272 NAB2Q15742 525 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 ANKRD20A4Q4UJ75 823 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 C6orf163Q5TEZ5 329 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 C1orf146Q5VVC0 180 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 SEZ6L2Q6UXD5 910 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 FBXO33Q7Z6M2 555 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 CDR2LQ86X02 465 aaPredicted RBP5.38□□□□□ -1.55
HERC4-205ENST00000412272 TAGAPQ8N103 731 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 CRYBG2Q8N1P7 616 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 SPATA5Q8NB90 893 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 DDI1Q8WTU0 396 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 LBHD1Q9BQE6 289 aaPredicted RBP5.38□□□□□ -1.55
HERC4-205ENST00000412272 FSD1Q9BTV5 496 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 CADM1Q9BY67 442 aaKnown RBP5.38□□□□□ -1.55
HERC4-205ENST00000412272 OR2B2Q9GZK3 357 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 ZNF696Q9H7X3 374 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms