RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 ITIH5Q86UX2 942 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 SLC44A2Q8IWA5 706 aaPredicted RBP7.56□□□□□ -1.2
PTPN3-203ENST00000412145 HPS1Q92902 700 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 CYP3A43Q9HB55 503 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 RNF146Q9NTX7 359 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 KCNK4Q9NYG8 393 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 GABBR1Q9UBS5 961 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 KBTBD13C9JR72 458 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 TSC22D2O75157 780 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 TADA2AO75478 443 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 ALADP13716 330 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 ATF6P18850 670 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 NTSP30990 170 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 UGT1A5P35504 534 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 DHRSXQ8N5I4 330 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 VCPIP1Q96JH7 1222 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 LRRC1Q9BTT6 524 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 TRIM9Q9C026 710 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 ZNF232Q9UNY5 417 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 TRIM43BA6NCK2 446 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 G3V2T6 193 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 TRDMT1O14717 391 aaKnown RBP7.56□□□□□ -1.2
PTPN3-203ENST00000412145 CLOCKO15516 846 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 RGS14O43566 566 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 DHFRP00374 187 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 CSH1P0DML2 217 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 CSH2P0DML3 217 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 NFKB1P19838 968 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 SLC29A2Q14542 456 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 RASA2Q15283 850 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 TAF13Q15543 124 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 TXNRD1Q16881 649 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 SPANXN3Q5MJ09 141 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 LYPLAL1Q5VWZ2 237 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 IZUMO2Q6UXV1 221 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 EFCAB6Q5THR3 1501 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 PBRM1Q86U86 1689 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 MPZL2O60487 215 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 SASH1O94885 1247 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 GLP2RO95838 553 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 LCP1P13796 627 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 CDC16Q13042 620 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 ANO7Q6IWH7 933 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 TDRD5Q8NAT2 981 aaKnown RBP7.56□□□□□ -1.2
PTPN3-203ENST00000412145 TRIM2Q9C040 744 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 INTS7Q9NVH2 962 aaKnown RBP7.56□□□□□ -1.2
PTPN3-203ENST00000412145 NDUFAF1Q9Y375 327 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 PCDHGA4Q9Y5G9 962 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 RPS6KL1Q9Y6S9 549 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 SERPINA1P01009 418 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 CYP2A6P11509 494 aaPredicted RBP7.56□□□□□ -1.2
PTPN3-203ENST00000412145 ME2P23368 584 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 GP5P40197 560 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 MGAT5Q09328 741 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 BMT2Q1RMZ1 405 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 SWI5Q1ZZU3 235 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 EIF3MQ7L2H7 374 aaKnown RBP7.56□□□□□ -1.2
PTPN3-203ENST00000412145 TEX13BQ9BXU2 312 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 PUS3Q9BZE2 481 aaKnown RBP7.56□□□□□ -1.2
PTPN3-203ENST00000412145 NOL6Q9H6R4 1146 aaKnown RBP7.56□□□□□ -1.2
PTPN3-203ENST00000412145 METTL5Q9NRN9 209 aaKnown RBP7.56□□□□□ -1.2
PTPN3-203ENST00000412145 MRTO4Q9UKD2 239 aaKnown RBP7.56□□□□□ -1.2
PTPN3-203ENST00000412145 CROTQ9UKG9 612 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 ENTPD4Q9Y227 616 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 ESYT3A0FGR9 886 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 PHF20L1A8MW92 1017 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 BAIAP3O94812 1187 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 OR6A2O95222 327 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 MOCS2O96007 188 aaPredicted RBP7.56□□□□□ -1.2
PTPN3-203ENST00000412145 CPT1AP50416 773 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 CACNA2D1P54289 1103 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 GALCP54803 685 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 CYP2A13Q16696 494 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 ALFQ53S48 1182 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 GRAMD1CQ8IYS0 662 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 SCAIQ8N9R8 606 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 STRBPQ96SI9 672 aaKnown RBP7.56□□□□□ -1.2
PTPN3-203ENST00000412145 BTBD10Q9BSF8 475 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 SCUBE2Q9NQ36 999 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.56□□□□□ -1.2
PTPN3-203ENST00000412145 UBQLN1Q9UMX0 589 aaKnown RBP7.56□□□□□ -1.2
PTPN3-203ENST00000412145 GTF2A1LQ9UNN4 478 aa7.56□□□□□ -1.2
PTPN3-203ENST00000412145 PALLDQ8WX93 1383 aa7.55□□□□□ -1.2
PTPN3-203ENST00000412145 GNB5O14775 395 aa7.55□□□□□ -1.2
PTPN3-203ENST00000412145 DNAJA2O60884 412 aa7.55□□□□□ -1.2
PTPN3-203ENST00000412145 EPN2O95208 641 aa7.55□□□□□ -1.2
PTPN3-203ENST00000412145 TAF6P49848 677 aa7.55□□□□□ -1.2
PTPN3-203ENST00000412145 CDK16Q00536 496 aa7.55□□□□□ -1.2
PTPN3-203ENST00000412145 CACNB1Q02641 598 aaPredicted RBP7.55□□□□□ -1.2
PTPN3-203ENST00000412145 FAM228AQ86W67 206 aa7.55□□□□□ -1.2
PTPN3-203ENST00000412145 SYTL1Q8IYJ3 562 aa7.55□□□□□ -1.2
PTPN3-203ENST00000412145 HS6ST3Q8IZP7 471 aa7.55□□□□□ -1.2
PTPN3-203ENST00000412145 RASGRP4Q8TDF6 673 aa7.55□□□□□ -1.2
PTPN3-203ENST00000412145 UBASH3BQ8TF42 649 aa7.55□□□□□ -1.2
PTPN3-203ENST00000412145 PIK3R5Q8WYR1 880 aa7.55□□□□□ -1.2
PTPN3-203ENST00000412145 PNPLA3Q9NST1 481 aa7.55□□□□□ -1.2
PTPN3-203ENST00000412145 GGA3Q9NZ52 723 aa7.55□□□□□ -1.2
PTPN3-203ENST00000412145 MEMO1Q9Y316 297 aa7.55□□□□□ -1.2
PTPN3-203ENST00000412145 PCDHGB3Q9Y5G1 929 aa7.55□□□□□ -1.2
PTPN3-203ENST00000412145 PRRG1O14668 218 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms