RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 TSPAN3O60637 253 aa14.91□□□□□ -0.02
HLA-DQB2-229ENST00000411527 HLA-EP13747 358 aa14.91□□□□□ -0.02
HLA-DQB2-229ENST00000411527 CSNK1EP49674 416 aaKnown RBP14.91□□□□□ -0.02
HLA-DQB2-229ENST00000411527 COL28A1Q2UY09 1125 aa14.91□□□□□ -0.02
HLA-DQB2-229ENST00000411527 DBX2Q6ZNG2 339 aa14.91□□□□□ -0.02
HLA-DQB2-229ENST00000411527 PIGZQ86VD9 579 aa14.91□□□□□ -0.02
HLA-DQB2-229ENST00000411527 FAM186BQ8IYM0 893 aa14.91□□□□□ -0.02
HLA-DQB2-229ENST00000411527 C1orf216Q8TAB5 229 aa14.91□□□□□ -0.02
HLA-DQB2-229ENST00000411527 UBXN6Q9BZV1 441 aa14.91□□□□□ -0.02
HLA-DQB2-229ENST00000411527 MAPK8IP1Q9UQF2 711 aa14.91□□□□□ -0.02
HLA-DQB2-229ENST00000411527 TMEM131Q92545 1883 aa14.91□□□□□ -0.02
HLA-DQB2-229ENST00000411527 NUMA1Q14980 2115 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 GOLGA8CPA6NN73 597 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 FLRT2O43155 660 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 MYL1P05976 194 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 ATXN1LP0C7T5 689 aaKnown RBP14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 PFKFB1P16118 471 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 PSMC2P35998 433 aaKnown RBP14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 TKTL1P51854 596 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 DNM1Q05193 864 aaKnown RBP14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 NFIL3Q16649 462 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 MPPE1Q53F39 396 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 RAB41Q5JT25 222 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 TMPRSS7Q7RTY8 843 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 PDZD3Q86UT5 571 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 FAM217AQ8IXS0 508 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 SLC4A11Q8NBS3 891 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 OR2T3Q8NH03 318 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 BAHD1Q8TBE0 780 aaPredicted RBP14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 PLD4Q96BZ4 506 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 TMEM176AQ96HP8 235 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 CDC6Q99741 560 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 ARID3AQ99856 593 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 PCED1AQ9H1Q7 454 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 LHX5Q9H2C1 402 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 C6orf106Q9H6K1 298 aaPredicted RBP14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 TMEM8AQ9HCN3 771 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 CISHQ9NSE2 258 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 USP25Q9UHP3 1055 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 PCDHGB2Q9Y5G2 931 aa14.9□□□□□ -0.02
HLA-DQB2-229ENST00000411527 ANKRD11Q6UB99 2663 aaPredicted RBP14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 ZBED1O96006 694 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 RPL13P26373 211 aaKnown RBP14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 ACSL1P33121 698 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 HARS2P49590 506 aaKnown RBP14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 AFF3P51826 1226 aaKnown RBP14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 RAD23BP54727 409 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 SLC8A3P57103 927 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 ENPEPQ07075 957 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 MAPK8IP2Q13387 824 aaPredicted RBP14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 ADAM9Q13443 819 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 CAMK2GQ13555 558 aaPredicted RBP14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 SUZ12Q15022 739 aaKnown RBP14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 TRIP4Q15650 581 aaPredicted RBP14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 KIF19Q2TAC6 998 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 FNDC3BQ53EP0 1204 aaKnown RBP14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 KRT39Q6A163 491 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 PM20D1Q6GTS8 502 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 FMNL3Q8IVF7 1028 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 TTC39CQ8N584 583 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 ZNF366Q8N895 744 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 ANKRD52Q8NB46 1076 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 CYB5D2Q8WUJ1 264 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 HNRNPLLQ8WVV9 542 aaKnown RBP14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 NDRG1Q92597 394 aaKnown RBP14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 SEMA4DQ92854 862 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 CCDC47Q96A33 483 aaKnown RBP14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 ULBP1Q9BZM6 244 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 TOR4AQ9NXH8 423 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 PLA2G4CQ9UP65 541 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 BTBD3Q9Y2F9 522 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 RAXQ9Y2V3 346 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 SNX11Q9Y5W9 270 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 SLCO1B1Q9Y6L6 691 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 FREM2Q5SZK8 3169 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 NBEAQ8NFP9 2946 aa14.89□□□□□ -0.03
HLA-DQB2-229ENST00000411527 RHOBTB3O94955 611 aa14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 HSP90AA1P07900 732 aaKnown RBP14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 PRR29P0C7W0 189 aa14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 CMA1P23946 247 aa14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 HOXD9P28356 352 aaPredicted RBP14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 HLA-FP30511 346 aa14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 GTF2H1P32780 548 aa14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 TEAD4Q15561 434 aa14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 SOWAHCQ53LP3 525 aaPredicted RBP14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 ARHGAP17Q68EM7 881 aa14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 CHST9Q7L1S5 443 aa14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 MARCH9Q86YJ5 346 aa14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 FBXL13Q8NEE6 735 aa14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 TATDN2Q93075 761 aa14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 TMA16Q96EY4 203 aaKnown RBP14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 TMEM245Q9H330 911 aa14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 OLA1Q9NTK5 396 aaKnown RBP14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 ANKRD6Q9Y2G4 727 aa14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.88□□□□□ -0.03
HLA-DQB2-229ENST00000411527 KNL1Q8NG31 2342 aa14.87□□□□□ -0.03
HLA-DQB2-229ENST00000411527 TULP2O00295 520 aa14.87□□□□□ -0.03
HLA-DQB2-229ENST00000411527 KCNK3O14649 394 aa14.87□□□□□ -0.03
HLA-DQB2-229ENST00000411527 SEMA4FO95754 770 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms