RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 COL6A1P12109 1028 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 ELK3P41970 407 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 MAGEA3P43357 314 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 ZNF33AQ06730 810 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 KCNA10Q16322 511 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 QPCTQ16769 361 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 MSS51Q4VC12 460 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 FAM171BQ6P995 826 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 ZNF449Q6P9G9 518 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 KCNT2Q6UVM3 1135 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 CCDC185Q8N715 623 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 RNF139Q8WU17 664 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 SLC44A1Q8WWI5 657 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 SPATA13Q96N96 652 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 TSEN34Q9BSV6 310 aaKnown RBP14.03□□□□□ -0.16
LIMS1-205ENST00000410093 DTLQ9NZJ0 730 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 PRKAG2Q9UGJ0 569 aa14.03□□□□□ -0.16
LIMS1-205ENST00000410093 USP15Q9Y4E8 981 aaPredicted RBP14.03□□□□□ -0.16
LIMS1-205ENST00000410093 PATJQ8NI35 1801 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 TCRBV7S3A2A0A539 114 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 MOXD2PA6NHM9 499 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 CCT8L1PA6NM43 557 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 TCP11X1B4DZS4 312 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 AP3B1O00203 1094 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 HCRTO43612 131 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 INHBAP08476 426 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 MX2P20592 715 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 CNTFP26441 200 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 SSTR1P30872 391 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 ADRA1BP35368 520 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 SCNN1GP51170 649 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 ATN1P54259 1190 aaPredicted RBP14.02□□□□□ -0.16
LIMS1-205ENST00000410093 MAP3K7CLP57077 242 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 NAB1Q13506 487 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 PRKD1Q15139 912 aaPredicted RBP14.02□□□□□ -0.16
LIMS1-205ENST00000410093 SEPT7Q16181 437 aaKnown RBP14.02□□□□□ -0.16
LIMS1-205ENST00000410093 RAB6CQ53S08 254 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 RNF187Q5TA31 235 aaPredicted RBP14.02□□□□□ -0.16
LIMS1-205ENST00000410093 PM20D1Q6GTS8 502 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 ANKRD42Q8N9B4 389 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 PPP1R13LQ8WUF5 828 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 PCED1BQ96HM7 432 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 TGS1Q96RS0 853 aaKnown RBP14.02□□□□□ -0.16
LIMS1-205ENST00000410093 LPIN3Q9BQK8 851 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 RAB6CQ9H0N0 254 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 ETNK1Q9HBU6 452 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 ARHGEF4Q9NR80 690 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 FBXW11Q9UKB1 542 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 NOD1Q9Y239 953 aa14.02□□□□□ -0.16
LIMS1-205ENST00000410093 TCRBV9S1A1TA0A576 114 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 ERI2A8K979 691 aaKnown RBP14.01□□□□□ -0.17
LIMS1-205ENST00000410093 TYROBPO43914 113 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 ATP2C2O75185 946 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 KRT37O76014 449 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 OAS1P00973 400 aaKnown RBP14.01□□□□□ -0.17
LIMS1-205ENST00000410093 LTFP02788 710 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 APRTP07741 180 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 CTSHP09668 335 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 TFE3P19532 575 aaPredicted RBP14.01□□□□□ -0.17
LIMS1-205ENST00000410093 CA4P22748 312 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 PRKCHP24723 683 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 ACAT1P24752 427 aaKnown RBP14.01□□□□□ -0.17
LIMS1-205ENST00000410093 SERPINB6P35237 376 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 IFNAR2P48551 515 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 SERPINB9P50453 376 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 TSPY1Q01534 308 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 PDK4Q16654 411 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 PARP6Q2NL67 630 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 TTC39BQ5VTQ0 682 aaPredicted RBP14.01□□□□□ -0.17
LIMS1-205ENST00000410093 NUGGCQ68CJ6 796 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 C4orf50Q6ZRC1 276 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 SLC26A11Q86WA9 606 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 LRRC6Q86X45 466 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 FAM131BQ86XD5 332 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 C10orf67Q8IYJ2 551 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 DCAKDQ8WVC6 231 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 CCT6BQ92526 530 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 VAT1Q99536 393 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 SMOQ99835 787 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 ULBP1Q9BZM6 244 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 VPS11Q9H270 941 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 C10orf88Q9H8K7 445 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 AGO3Q9H9G7 860 aaKnown RBP14.01□□□□□ -0.17
LIMS1-205ENST00000410093 DMAP1Q9NPF5 467 aaPredicted RBP14.01□□□□□ -0.17
LIMS1-205ENST00000410093 KANSL3Q9P2N6 904 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 ZC3H7BQ9UGR2 993 aaKnown RBP14.01□□□□□ -0.17
LIMS1-205ENST00000410093 CHMP2BQ9UQN3 213 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 ARL2BPQ9Y2Y0 163 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 STARD13Q9Y3M8 1113 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 PTPRDP23468 1912 aa14.01□□□□□ -0.17
LIMS1-205ENST00000410093 TMEM189-UBE2V1I3L0A0 370 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 EEF2KO00418 725 aaKnown RBP14□□□□□ -0.17
LIMS1-205ENST00000410093 CLDN5O00501 218 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 MT-ND3P03897 115 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 GOT1P17174 413 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 SYN1P17600 705 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 AMPD1P23109 780 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 CD52P31358 61 aa14□□□□□ -0.17
LIMS1-205ENST00000410093 YWHAGP61981 247 aaKnown RBP eCLIP14□□□□□ -0.17
LIMS1-205ENST00000410093 GBE1Q04446 702 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms