RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 SCML2Q9UQR0 700 aa18.19■□□□□ 0.5
LRPPRC-203ENST00000409946 H0YGN5 161 aa18.19■□□□□ 0.5
LRPPRC-203ENST00000409946 IRAK2O43187 625 aa18.19■□□□□ 0.5
LRPPRC-203ENST00000409946 F9P00740 461 aa18.19■□□□□ 0.5
LRPPRC-203ENST00000409946 HAPLN1P10915 354 aaPredicted RBP18.19■□□□□ 0.5
LRPPRC-203ENST00000409946 EN2P19622 333 aaPredicted RBP18.19■□□□□ 0.5
LRPPRC-203ENST00000409946 RBL1P28749 1068 aa18.19■□□□□ 0.5
LRPPRC-203ENST00000409946 OR1D2P34982 312 aa18.19■□□□□ 0.5
LRPPRC-203ENST00000409946 LRIG3Q6UXM1 1119 aa18.19■□□□□ 0.5
LRPPRC-203ENST00000409946 SLC39A11Q8N1S5 342 aa18.19■□□□□ 0.5
LRPPRC-203ENST00000409946 GIPC2Q8TF65 315 aa18.19■□□□□ 0.5
LRPPRC-203ENST00000409946 RNF34Q969K3 372 aa18.19■□□□□ 0.5
LRPPRC-203ENST00000409946 ZNF558Q96NG5 402 aa18.19■□□□□ 0.5
LRPPRC-203ENST00000409946 FAM129AQ9BZQ8 928 aa18.19■□□□□ 0.5
LRPPRC-203ENST00000409946 USP29Q9HBJ7 922 aa18.19■□□□□ 0.5
LRPPRC-203ENST00000409946 RCOR3Q9P2K3 495 aaPredicted RBP18.19■□□□□ 0.5
LRPPRC-203ENST00000409946 NFS1Q9Y697 457 aa18.19■□□□□ 0.5
LRPPRC-203ENST00000409946 KCNN4O15554 427 aa18.18■□□□□ 0.5
LRPPRC-203ENST00000409946 SEMA3BQ13214 749 aa18.18■□□□□ 0.5
LRPPRC-203ENST00000409946 DPYSQ14117 519 aa18.18■□□□□ 0.5
LRPPRC-203ENST00000409946 RNASEH2BQ5TBB1 312 aaKnown RBP18.18■□□□□ 0.5
LRPPRC-203ENST00000409946 EMC10Q5UCC4 262 aa18.18■□□□□ 0.5
LRPPRC-203ENST00000409946 RFX8Q6ZV50 586 aa18.18■□□□□ 0.5
LRPPRC-203ENST00000409946 BEND5Q7L4P6 421 aa18.18■□□□□ 0.5
LRPPRC-203ENST00000409946 COLGALT1Q8NBJ5 622 aa18.18■□□□□ 0.5
LRPPRC-203ENST00000409946 BBOF1Q8ND07 529 aa18.18■□□□□ 0.5
LRPPRC-203ENST00000409946 UHMK1Q8TAS1 419 aaKnown RBP18.18■□□□□ 0.5
LRPPRC-203ENST00000409946 ARL8AQ96BM9 186 aa18.18■□□□□ 0.5
LRPPRC-203ENST00000409946 TRIM62Q9BVG3 475 aa18.18■□□□□ 0.5
LRPPRC-203ENST00000409946 SMOC2Q9H3U7 446 aa18.18■□□□□ 0.5
LRPPRC-203ENST00000409946 DTLQ9NZJ0 730 aa18.18■□□□□ 0.5
LRPPRC-203ENST00000409946 TPX2Q9ULW0 747 aaKnown RBP18.18■□□□□ 0.5
LRPPRC-203ENST00000409946 NR2E3Q9Y5X4 410 aa18.18■□□□□ 0.5
LRPPRC-203ENST00000409946 ATF6P18850 670 aa18.17■□□□□ 0.5
LRPPRC-203ENST00000409946 AIF1P55008 147 aa18.17■□□□□ 0.5
LRPPRC-203ENST00000409946 CAV1Q03135 178 aa18.17■□□□□ 0.5
LRPPRC-203ENST00000409946 GAD2Q05329 585 aa18.17■□□□□ 0.5
LRPPRC-203ENST00000409946 EIF4EBP2Q13542 120 aaPredicted RBP18.17■□□□□ 0.5
LRPPRC-203ENST00000409946 ARL13BQ3SXY8 428 aa18.17■□□□□ 0.5
LRPPRC-203ENST00000409946 CEP85LQ5SZL2 805 aa18.17■□□□□ 0.5
LRPPRC-203ENST00000409946 KIAA1841Q6NSI8 718 aa18.17■□□□□ 0.5
LRPPRC-203ENST00000409946 DENND5BQ6ZUT9 1274 aa18.17■□□□□ 0.5
LRPPRC-203ENST00000409946 C16orf59Q7L2K0 433 aa18.17■□□□□ 0.5
LRPPRC-203ENST00000409946 TP53INP2Q8IXH6 220 aa18.17■□□□□ 0.5
LRPPRC-203ENST00000409946 FBXO44Q9H4M3 255 aa18.17■□□□□ 0.5
LRPPRC-203ENST00000409946 MYO18AQ92614 2054 aaKnown RBP18.17■□□□□ 0.5
LRPPRC-203ENST00000409946 ZBBXA8MT70 800 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 SHBGP04278 402 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 ZFXP17010 805 aaPredicted RBP18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 YWHAQP27348 245 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 TPI1P60174 286 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 SKOR1P84550 965 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 TTMPQ5BVD1 217 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 ANKRD22Q5VYY1 191 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 SLC8B1Q6J4K2 584 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 CMTR2Q8IYT2 770 aaKnown RBP18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 AUTS2Q8WXX7 1259 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 FBXO32Q969P5 355 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 TMEM169Q96HH4 297 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 YME1L1Q96TA2 773 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 CLSTN3Q9BQT9 956 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 PABPC3Q9H361 631 aaKnown RBP18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 CDC42EP4Q9H3Q1 356 aaKnown RBP18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 IL23AQ9NPF7 189 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 IL37Q9NZH6 218 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 PLXNA4Q9HCM2 1894 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 DCLK1O15075 740 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 SOD2P04179 222 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 RARGP13631 454 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 ZNF844Q08AG5 666 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 TAF10Q12962 218 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 SLMAPQ14BN4 828 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 MON1AQ86VX9 555 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 CPT1BQ92523 772 aa18.16■□□□□ 0.5
LRPPRC-203ENST00000409946 TCRBV7S3A2A0A539 114 aa18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 BCLAF3A2AJT9 711 aaKnown RBP18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 GOLGA8MH3BSY2 632 aa18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 ERCC2P18074 760 aa18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 DNAJB2P25686 324 aa18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 SLC29A2Q14542 456 aa18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 SLC45A4Q5BKX6 768 aa18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 SPDYCQ5MJ68 293 aa18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 SYCP2LQ5T4T6 812 aa18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 RASIP1Q5U651 963 aa18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 LRRC31Q6UY01 552 aa18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 CDKL3Q8IVW4 592 aaPredicted RBP18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 PRCCQ92733 491 aaPredicted RBP18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 OLFM3Q96PB7 478 aa18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 QKIQ96PU8 341 aaKnown RBP eCLIP18.15■□□□□ 0.52e-7■■■■■ 50.4
LRPPRC-203ENST00000409946 SIK2Q9H0K1 926 aa18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 ARHGEF38Q9NXL2 777 aa18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 OR12D3Q9UGF7 316 aa18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 XPO7Q9UIA9 1087 aaKnown RBP18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 MAGED2Q9UNF1 606 aaPredicted RBP18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 FARP1Q9Y4F1 1045 aaPredicted RBP18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 BACE2Q9Y5Z0 518 aa18.15■□□□□ 0.5
LRPPRC-203ENST00000409946 FAM92AA1XBS5 289 aa18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 SLC38A8A6NNN8 435 aa18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 RIPK2O43353 540 aa18.14■□□□□ 0.5
LRPPRC-203ENST00000409946 LRIG2O94898 1065 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms