RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 DMPKQ09013 629 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 RTL3Q8N8U3 475 aaKnown RBP13.28□□□□□ -0.28
RNF43-201ENST00000407977 WDR36Q8NI36 951 aaKnown RBP13.28□□□□□ -0.28
RNF43-201ENST00000407977 TAS1R2Q8TE23 839 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 HDHD2Q9H0R4 259 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 ELOVL6Q9H5J4 265 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 BTBD3Q9Y2F9 522 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 PROCP04070 461 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 PTDSS1P48651 473 aaKnown RBP13.28□□□□□ -0.28
RNF43-201ENST00000407977 NTRK3Q16288 839 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 OTUD3Q5T2D3 398 aaPredicted RBP13.28□□□□□ -0.28
RNF43-201ENST00000407977 GLB1LQ6UWU2 654 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 ROGDIQ9GZN7 287 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 PDGFCQ9NRA1 345 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.28□□□□□ -0.28
RNF43-201ENST00000407977 CYP1A1P04798 512 aaPredicted RBP13.28□□□□□ -0.28
RNF43-201ENST00000407977 NUDT17P0C025 328 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 ODC1P11926 461 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 CCDC130P13994 396 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 ALOX12P18054 663 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 ZNF177Q13360 481 aaPredicted RBP13.28□□□□□ -0.28
RNF43-201ENST00000407977 AAGABQ6PD74 315 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 SEPHS2Q99611 448 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 C6orf203Q9P0P8 240 aaPredicted RBP13.28□□□□□ -0.28
RNF43-201ENST00000407977 MEI4A8MW99 385 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 KBTBD13C9JR72 458 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 PLA2G6O60733 806 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 ALDH1A3P47895 512 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 CDC16Q13042 620 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 CASP12Q6UXS9 341 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 NEK10Q6ZWH5 1172 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 C8orf59Q8N0T1 100 aaPredicted RBP13.28□□□□□ -0.28
RNF43-201ENST00000407977 RXFP2Q8WXD0 754 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 SPACA6W5XKT8 324 aa13.28□□□□□ -0.28
RNF43-201ENST00000407977 A0A096LPK6 155 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 BTNL10A8MVZ5 291 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 NME5P56597 212 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 PTPN11Q06124 597 aaPredicted RBP13.27□□□□□ -0.28
RNF43-201ENST00000407977 SFSWAPQ12872 951 aaKnown RBP13.27□□□□□ -0.28
RNF43-201ENST00000407977 MTA1Q13330 715 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 RRP1BQ14684 758 aaKnown RBP13.27□□□□□ -0.28
RNF43-201ENST00000407977 SCARA3Q6AZY7 606 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 CHMP1BQ7LBR1 199 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 AADATQ8N5Z0 425 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 AMER2Q8N7J2 671 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 TSPAN14Q8NG11 270 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 STARD8Q92502 1023 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 GRIP2Q9C0E4 1043 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 CISHQ9NSE2 258 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 TUBA8Q9NY65 449 aaPredicted RBP13.27□□□□□ -0.28
RNF43-201ENST00000407977 GGA3Q9NZ52 723 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 VAV3Q9UKW4 847 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 PPP2R1BP30154 601 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 GPC1P35052 558 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 HK2P52789 917 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 RPS7P62081 194 aaKnown RBP13.27□□□□□ -0.28
RNF43-201ENST00000407977 PWP1Q13610 501 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 PGS1Q32NB8 556 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 C10orf120Q5SQS8 335 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 DDX53Q86TM3 631 aaKnown RBP13.27□□□□□ -0.28
RNF43-201ENST00000407977 S100ZQ8WXG8 99 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 OTUD5Q96G74 571 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 TMEM176AQ96HP8 235 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 SLC7A5P2Q9GIP4 190 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 KLHL28Q9NXS3 571 aa13.27□□□□□ -0.28
RNF43-201ENST00000407977 CCDC154A6NI56 674 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 DCXO43602 365 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 STX11O75558 287 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 ICAM1P05362 532 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 PABPC1P11940 636 aaKnown RBP13.27□□□□□ -0.29
RNF43-201ENST00000407977 CYP2F1P24903 491 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 ZNF135P52742 658 aaPredicted RBP13.27□□□□□ -0.29
RNF43-201ENST00000407977 PLIN5Q00G26 463 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 EIF2B5Q13144 721 aaKnown RBP13.27□□□□□ -0.29
RNF43-201ENST00000407977 TYW3Q6IPR3 259 aaKnown RBP13.27□□□□□ -0.29
RNF43-201ENST00000407977 SDE2Q6IQ49 451 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 SV2AQ7L0J3 742 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 C4orf19Q8IY42 314 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 PIWIL2Q8TC59 973 aaKnown RBP13.27□□□□□ -0.29
RNF43-201ENST00000407977 MTMR12Q9C0I1 747 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 CRNNQ9UBG3 495 aaPredicted RBP13.27□□□□□ -0.29
RNF43-201ENST00000407977 PCYOX1Q9UHG3 505 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 SH3BP1Q9Y3L3 701 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 ADRA1DP25100 572 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 PRKCIP41743 596 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 MYL6P60660 151 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 NAA20P61599 178 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 FAM228AQ86W67 206 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 ADHFE1Q8IWW8 467 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 KATNAL2Q8IYT4 538 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 KIAA0895Q8NCT3 520 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 FAM81AQ8TBF8 368 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 UTP15Q8TED0 518 aaKnown RBP13.27□□□□□ -0.29
RNF43-201ENST00000407977 RNF145Q96MT1 663 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 RPRD1AQ96P16 312 aaPredicted RBP13.27□□□□□ -0.29
RNF43-201ENST00000407977 FICDQ9BVA6 458 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 TBC1D10AQ9BXI6 508 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 ADPRHL2Q9NX46 363 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 CLTCL1P53675 1640 aa13.27□□□□□ -0.29
RNF43-201ENST00000407977 RECQL5O94762 991 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms