RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 SPRYD3Q8NCJ5 442 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 CADM4Q8NFZ8 388 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 ADAMTS14Q8WXS8 1223 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 TMEM176AQ96HP8 235 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 UBXN6Q9BZV1 441 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 DCLK3Q9C098 648 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 TOR4AQ9NXH8 423 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 MARCH2Q9P0N8 246 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 PCOLCE2Q9UKZ9 415 aa13.49□□□□□ -0.25
PRAME-206ENST00000406503 A0A1B0GTW7 788 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 SLC12A8A0AV02 714 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 METTL12A8MUP2 240 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 NPC1O15118 1278 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 ZBTB24O43167 697 aaPredicted RBP13.48□□□□□ -0.25
PRAME-206ENST00000406503 HLA-EP13747 358 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 HLA-FP30511 346 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 GTF2H1P32780 548 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 SYKP43405 635 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 SGSHP51688 502 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 TKTL1P51854 596 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 PDE4CQ08493 712 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 HNRNPDQ14103 355 aaKnown RBP13.48□□□□□ -0.25
PRAME-206ENST00000406503 STARD3Q14849 445 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 CBWD6Q4V339 395 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 CBWD3Q5JTY5 395 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 WDR45BQ5MNZ6 344 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 CBWD5Q5RIA9 395 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 GLRX5Q86SX6 157 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 HSCBQ8IWL3 235 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 UBR7Q8N806 425 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 ANKRD52Q8NB46 1076 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 SIPA1Q96FS4 1042 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 FAXDC2Q96IV6 333 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 HEXIM2Q96MH2 286 aaKnown RBP13.48□□□□□ -0.25
PRAME-206ENST00000406503 CDK5RAP1Q96SZ6 601 aaKnown RBP13.48□□□□□ -0.25
PRAME-206ENST00000406503 ULBP1Q9BZM6 244 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 RAB20Q9NX57 234 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 FNDC3AQ9Y2H6 1198 aaKnown RBP13.48□□□□□ -0.25
PRAME-206ENST00000406503 KNTC1P50748 2209 aa13.48□□□□□ -0.25
PRAME-206ENST00000406503 SHROOM3Q8TF72 1996 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 MEI4A8MW99 385 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 GABBR2O75899 941 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 DKK1O94907 266 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 KRT13P13646 458 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 GNSP15586 552 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 TRIM21P19474 475 aaKnown RBP13.47□□□□□ -0.25
PRAME-206ENST00000406503 MXI1P50539 228 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 SCAPQ12770 1279 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 CAMK2GQ13555 558 aaPredicted RBP13.47□□□□□ -0.25
PRAME-206ENST00000406503 COL9A2Q14055 689 aaPredicted RBP13.47□□□□□ -0.25
PRAME-206ENST00000406503 EIF4HQ15056 248 aaKnown RBP13.47□□□□□ -0.25
PRAME-206ENST00000406503 PTPRNQ16849 979 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 LRSAM1Q6UWE0 723 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 DBX2Q6ZNG2 339 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 KRBA2Q6ZNG9 492 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 KIAA0907Q7Z7F0 614 aaPredicted RBP13.47□□□□□ -0.25
PRAME-206ENST00000406503 ZNF366Q8N895 744 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 FBXL13Q8NEE6 735 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 WFDC5Q8TCV5 224 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 PRCCQ92733 491 aaPredicted RBP13.47□□□□□ -0.25
PRAME-206ENST00000406503 PLD4Q96BZ4 506 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 ZDHHC5Q9C0B5 715 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 TMEM245Q9H330 911 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 SFMBT1Q9UHJ3 866 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 EIF2B4Q9UI10 523 aaKnown RBP13.47□□□□□ -0.25
PRAME-206ENST00000406503 STOML2Q9UJZ1 356 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 TSPAN16Q9UKR8 245 aa13.47□□□□□ -0.25
PRAME-206ENST00000406503 GCN1Q92616 2671 aaKnown RBP13.47□□□□□ -0.25
PRAME-206ENST00000406503 URB1O60287 2271 aaKnown RBP13.47□□□□□ -0.25
PRAME-206ENST00000406503 YJEFN3A6XGL0 299 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 E7ENQ6 273 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 XPO1O14980 1071 aaKnown RBP13.46□□□□□ -0.25
PRAME-206ENST00000406503 BCAT2O15382 392 aaPredicted RBP13.46□□□□□ -0.25
PRAME-206ENST00000406503 ZBED1O96006 694 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 EPHX1P07099 455 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 ACSL1P33121 698 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 GOLGA7BQ2TAP0 167 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 EDRF1Q3B7T1 1238 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 PKDCCQ504Y2 493 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 CCNI2Q6ZMN8 369 aaPredicted RBP13.46□□□□□ -0.25
PRAME-206ENST00000406503 ADIPOR2Q86V24 386 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 FMNL3Q8IVF7 1028 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 ARHGAP18Q8N392 663 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.46□□□□□ -0.25
PRAME-206ENST00000406503 OR2T3Q8NH03 318 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 DDI1Q8WTU0 396 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 CYB5D2Q8WUJ1 264 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 UCMAQ8WVF2 138 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 SPATA32Q96LK8 384 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 ORAI3Q9BRQ5 295 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 SLC2A11Q9BYW1 496 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 CIPCQ9C0C6 399 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 MIR1-1HGQ9H1L0 117 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 C6orf106Q9H6K1 298 aaPredicted RBP13.46□□□□□ -0.25
PRAME-206ENST00000406503 GAREM1Q9H706 876 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 LHX6Q9UPM6 363 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 BTBD3Q9Y2F9 522 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 COQ4Q9Y3A0 265 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 GPSM3Q9Y4H4 160 aa13.46□□□□□ -0.25
PRAME-206ENST00000406503 MSI1O43347 362 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms