RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 MECRQ9BV79 373 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 ZNF768Q9H5H4 540 aaKnown RBP5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 ZNF703Q9H7S9 590 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 BLOC1S4Q9NUP1 217 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 AASSQ9UDR5 926 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 CNOT7Q9UIV1 285 aaKnown RBP5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 CCNL1Q9UK58 526 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 GABRQQ9UN88 632 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 CARMIL1Q5VZK9 1371 aa5.28□□□□□ -1.56
HMGB3P18-201ENST00000406327 CUX2O14529 1486 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 MUSKO15146 869 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 TIMM44O43615 452 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 LPXNO60711 386 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 FAM20BO75063 409 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 PEX11BO96011 259 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 ALDOAP04075 364 aaKnown RBP5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 IL6RP08887 468 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 HOXA5P20719 270 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 PTGS2P35354 604 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 RCAN1P53805 252 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 PDE1AP54750 535 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 ICAM4Q14773 271 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 PTPRRQ15256 657 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 SF3B3Q15393 1217 aaKnown RBP5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 TBC1D25Q3MII6 688 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 ZNF484Q5JVG2 852 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 CBWD5Q5RIA9 395 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 CCDC30Q5VVM6 783 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 PTCHD4Q6ZW05 846 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 NEK10Q6ZWH5 1172 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 MAVSQ7Z434 540 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 OR52L2PQ8NGH6 319 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 TBC1D22AQ8WUA7 517 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 GLMPQ8WWB7 406 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 NPIPB3Q92617 1050 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 RNF125Q96EQ8 232 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 RBM17Q96I25 401 aaKnown RBP5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 PBKQ96KB5 322 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 C20orf173Q96LM9 149 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 ADAM2Q99965 735 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 AGXT2Q9BYV1 514 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 ACAD9Q9H845 621 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 PLEKHA5Q9HAU0 1116 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 CD248Q9HCU0 757 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 TRPC5Q9UL62 973 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 CYP46A1Q9Y6A2 500 aa5.27□□□□□ -1.57
HMGB3P18-201ENST00000406327 FGD5Q6ZNL6 1462 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 TSPAN4O14817 238 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 PRICKLE3O43900 615 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 ORC4O43929 436 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 PEX1O43933 1283 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 TJP3O95049 919 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 SPDEFO95238 335 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 VNN1O95497 513 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 PDHA1P08559 390 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 CYP3A4P08684 503 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 IGHMBP2P38935 993 aaKnown RBP5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 PAFAH1B1P43034 410 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 CLCN2P51788 898 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 DCAF7P61962 342 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 SP2Q02086 613 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 CCDC15Q0P6D6 951 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 DNASE1L3Q13609 305 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 THOC5Q13769 683 aaKnown RBP5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 FAM187BQ17R55 369 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 NRN1LQ496H8 165 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 ABHD17BQ5VST6 288 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 ITPRIPL1Q6GPH6 555 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 ACSM6Q6P461 480 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 TMEM88Q6PEY1 159 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 SYNE3Q6ZMZ3 975 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 WDR53Q7Z5U6 358 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 ARHGEF19Q8IW93 802 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 TDRD7Q8NHU6 1098 aaKnown RBP5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 WDYHV1Q96HA8 205 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 FBXL20Q96IG2 436 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 LOXL4Q96JB6 756 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 PLEKHA2Q9HB19 425 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 PPP1R14DQ9NXH3 145 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 KCTD5Q9NXV2 234 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 MGAT4CQ9UBM8 478 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 AMFRQ9UKV5 643 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 FZD1Q9UP38 647 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 TESMINQ9Y4I5 508 aa5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 TDRD9Q8NDG6 1382 aaKnown RBP5.26□□□□□ -1.57
HMGB3P18-201ENST00000406327 ADGRA2Q96PE1 1338 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 PEX12O00623 359 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 CES2O00748 559 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 YY2O15391 372 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 MPPED1O15442 326 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 SPRY2O43597 315 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 TULP3O75386 442 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 HEXIM1O94992 359 aaKnown RBP5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 SLC3A2P08195 630 aaKnown RBP5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 WEE2P0C1S8 567 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 MYCLP12524 364 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 CHN1P15882 459 aa5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 ZFXP17010 805 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 HNRNPMP52272 730 aaKnown RBP eCLIP5.25□□□□□ -1.57
HMGB3P18-201ENST00000406327 RPL15P61313 204 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms