RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 LRRN4Q8WUT4 740 aa16.26■□□□□ 0.19
CDC42-203ENST00000400259 SMARCD1Q96GM5 515 aa16.26■□□□□ 0.19
CDC42-203ENST00000400259 SIGLEC10Q96LC7 697 aa16.26■□□□□ 0.19
CDC42-203ENST00000400259 EIF2B3Q9NR50 452 aaKnown RBP16.26■□□□□ 0.19
CDC42-203ENST00000400259 TMEM30AQ9NV96 361 aa16.26■□□□□ 0.19
CDC42-203ENST00000400259 RRN3Q9NYV6 651 aa16.26■□□□□ 0.19
CDC42-203ENST00000400259 PADI3Q9ULW8 664 aa16.26■□□□□ 0.19
CDC42-203ENST00000400259 CYP11A1P05108 521 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 ASGR1P07306 291 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 INHBAP08476 426 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 ODC1P11926 461 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 SEMA3BQ13214 749 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 TIGD5Q53EQ6 642 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 ANKRD20A2Q5SQ80 823 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 ANKRD20A1Q5TYW2 823 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 ANKRD20A3Q5VUR7 823 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 CCSAPQ6IQ19 270 aaPredicted RBP16.25■□□□□ 0.19
CDC42-203ENST00000400259 PAIP2Q9BPZ3 127 aaKnown RBP16.25■□□□□ 0.19
CDC42-203ENST00000400259 PITPNM3Q9BZ71 974 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 WDR6Q9NNW5 1121 aaKnown RBP16.25■□□□□ 0.19
CDC42-203ENST00000400259 XPNPEP3Q9NQH7 507 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 IKBKGQ9Y6K9 419 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 YJEFN3A6XGL0 299 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 E7ENQ6 273 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 MGEA5O60502 916 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 OPHN1O60890 802 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 PIAS1O75925 651 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 MLNP12872 115 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 ADRA1BP35368 520 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 THPOP40225 353 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 HCAR3P49019 387 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 SLC18A2Q05940 514 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 CACNB2Q08289 660 aaPredicted RBP16.25■□□□□ 0.19
CDC42-203ENST00000400259 PDK1Q15118 436 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 HHATQ5VTY9 493 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 RNF43Q68DV7 783 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 SH2D5Q6ZV89 423 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 BHLHA9Q7RTU4 235 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 GPRIN1Q7Z2K8 1008 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 SLC26A11Q86WA9 606 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 GBP7Q8N8V2 638 aaPredicted RBP16.25■□□□□ 0.19
CDC42-203ENST00000400259 RNF169Q8NCN4 708 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 APBB2Q92870 758 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 CFAP36Q96G28 342 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 RTP3Q9BQQ7 232 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 ABCF3Q9NUQ8 709 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 HAUS2Q9NVX0 235 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 TIMM13Q9Y5L4 95 aaPredicted RBP16.25■□□□□ 0.19
CDC42-203ENST00000400259 RAD54BQ9Y620 910 aa16.25■□□□□ 0.19
CDC42-203ENST00000400259 A0A0U1RQF3 1178 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 CASTOR2A6NHX0 329 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 H0YHG0 523 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 DCLK1O15075 740 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 APOEP02649 317 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 CD52P31358 61 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 CACNA2D1P54289 1103 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 FAM171BQ6P995 826 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 LVRNQ6Q4G3 990 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 RFX8Q6ZV50 586 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 PRPF39Q86UA1 669 aaKnown RBP16.24■□□□□ 0.19
CDC42-203ENST00000400259 SCML4Q8N228 414 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 IRGQQ8WZA9 623 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 KCNK16Q96T55 309 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 EBNA1BP2Q99848 306 aaKnown RBP16.24■□□□□ 0.19
CDC42-203ENST00000400259 ACBD6Q9BR61 282 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 PAAF1Q9BRP4 392 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 TMPRSS4Q9NRS4 437 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 EEF2KO00418 725 aaKnown RBP16.24■□□□□ 0.19
CDC42-203ENST00000400259 EDF1O60869 148 aaKnown RBP16.24■□□□□ 0.19
CDC42-203ENST00000400259 LTFP02788 710 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 MT-ND3P03897 115 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 ALADP13716 330 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 GTF2A1P52655 376 aaPredicted RBP16.24■□□□□ 0.19
CDC42-203ENST00000400259 SARNPP82979 210 aaKnown RBP16.24■□□□□ 0.19
CDC42-203ENST00000400259 GRIK3Q13003 919 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 TRIM32Q13049 653 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 NME3Q13232 169 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 KCNA10Q16322 511 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 GALNTL6Q49A17 601 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 FAM26DQ5JW98 314 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 CYS1Q717R9 158 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 LRRC6Q86X45 466 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 SLC7A14Q8TBB6 771 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 LRRC8CQ8TDW0 803 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 MYCBPQ99417 103 aaPredicted RBP16.24■□□□□ 0.19
CDC42-203ENST00000400259 LGMNQ99538 433 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 FERMT1Q9BQL6 677 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.24■□□□□ 0.196e-23■■■■□ 22.6
CDC42-203ENST00000400259 GGT7Q9UJ14 662 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 FBXW11Q9UKB1 542 aa16.24■□□□□ 0.19
CDC42-203ENST00000400259 M0QZQ0 153 aa16.23■□□□□ 0.19
CDC42-203ENST00000400259 CAPN9O14815 690 aa16.23■□□□□ 0.19
CDC42-203ENST00000400259 PPP1R12AO14974 1030 aaPredicted RBP16.23■□□□□ 0.19
CDC42-203ENST00000400259 STK10O94804 968 aaKnown RBP16.23■□□□□ 0.19
CDC42-203ENST00000400259 NEK3P51956 506 aa16.23■□□□□ 0.19
CDC42-203ENST00000400259 ZNF135P52742 658 aaPredicted RBP16.23■□□□□ 0.19
CDC42-203ENST00000400259 FAAP100Q0VG06 881 aa16.23■□□□□ 0.19
CDC42-203ENST00000400259 LPIN1Q14693 890 aa16.23■□□□□ 0.19
CDC42-203ENST00000400259 TTC39BQ5VTQ0 682 aaPredicted RBP16.23■□□□□ 0.19
CDC42-203ENST00000400259 CD300LGQ6UXG3 332 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms