RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 CSHL1Q14406 222 aa9.84□□□□□ -0.83
CSMD1-202ENST00000400186 TMC3Q7Z5M5 1100 aa9.84□□□□□ -0.83
CSMD1-202ENST00000400186 NECAB2Q7Z6G3 386 aa9.84□□□□□ -0.83
CSMD1-202ENST00000400186 MICALL2Q8IY33 904 aa9.84□□□□□ -0.83
CSMD1-202ENST00000400186 KBTBD13C9JR72 458 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 ARHGAP15Q53QZ3 475 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 DAGLAQ9Y4D2 1042 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 BTN3A3O00478 584 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 FRG1Q14331 258 aaKnown RBP9.83□□□□□ -0.84
CSMD1-202ENST00000400186 SKIV2LQ15477 1246 aaKnown RBP9.83□□□□□ -0.84
CSMD1-202ENST00000400186 TMEM132CQ8N3T6 1108 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 POU5F2Q8N7G0 328 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 OSBPL6Q9BZF3 934 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 PCDH9Q9HC56 1237 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 AP4E1Q9UPM8 1137 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 ERVK-10P10266 1014 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 RXRBP28702 533 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 NSMCE2Q96MF7 247 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 APOL2Q9BQE5 337 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 SIK3Q9Y2K2 1263 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 NCAM2O15394 837 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 TKTP29401 623 aaKnown RBP9.83□□□□□ -0.84
CSMD1-202ENST00000400186 PCNX4Q63HM2 1172 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 ACOX2Q99424 681 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 BTBD3Q9Y2F9 522 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 ARID1AO14497 2285 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 TNS3Q68CZ2 1445 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 NDUFB5O43674 189 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 WARSP23381 471 aaKnown RBP9.83□□□□□ -0.84
CSMD1-202ENST00000400186 JAK1P23458 1154 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 MXRA8Q9BRK3 442 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 EHD3Q9NZN3 535 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 DNAJC5BQ9UF47 199 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 LIMD1Q9UGP4 676 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 BIRC5O15392 142 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 ZC3H11AO75152 810 aaKnown RBP eCLIP9.83□□□□□ -0.84
CSMD1-202ENST00000400186 NR3C2P08235 984 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 GHRP10912 638 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 HERVK_113P62684 666 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 ZNF844Q08AG5 666 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 ITGA9Q13797 1035 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 KCTD21Q4G0X4 260 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 DNAJC14Q6Y2X3 702 aaPredicted RBP9.83□□□□□ -0.84
CSMD1-202ENST00000400186 B3GNT6Q6ZMB0 384 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 FNDC5Q8NAU1 212 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 RPRD1AQ96P16 312 aaPredicted RBP9.83□□□□□ -0.84
CSMD1-202ENST00000400186 ISCA1Q9BUE6 129 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 ANKZF1Q9H8Y5 726 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 RWDD3Q9Y3V2 267 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 C2CD2LO14523 706 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 ATP5BP06576 529 aaKnown RBP9.83□□□□□ -0.84
CSMD1-202ENST00000400186 TSPAN19P0C672 248 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 ALDH9A1P49189 494 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 OXCT1P55809 520 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 ZCCHC8Q6NZY4 707 aaKnown RBP9.83□□□□□ -0.84
CSMD1-202ENST00000400186 RNASE11Q8TAA1 199 aaKnown RBP9.83□□□□□ -0.84
CSMD1-202ENST00000400186 FBXO32Q969P5 355 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 KRT6AP02538 564 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 MCL1Q07820 350 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 SBK1Q52WX2 424 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 C2CD6Q53TS8 623 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 ZNF438Q7Z4V0 828 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 SEPT12Q8IYM1 358 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 RNF145Q96MT1 663 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 FBXO21O94952 628 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 MAP3K14Q99558 947 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 ELP3Q9H9T3 547 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 ENTPD7Q9NQZ7 604 aa9.83□□□□□ -0.84
CSMD1-202ENST00000400186 NUP214P35658 2090 aaPredicted RBP9.83□□□□□ -0.84
CSMD1-202ENST00000400186 SLC2A4P14672 509 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 ALDH5A1P51649 535 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-202ENST00000400186 SNAPC2Q13487 334 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 BMPR2Q13873 1038 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 POU6F1Q14863 301 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 ACOT1Q86TX2 421 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 SEMA4DQ92854 862 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 RPRD1BQ9NQG5 326 aaKnown RBP9.82□□□□□ -0.84
CSMD1-202ENST00000400186 RABGEF1Q9UJ41 708 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 NAALADL1Q9UQQ1 740 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 ABCA9Q8IUA7 1624 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 KNTC1P50748 2209 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 CCDC130P13994 396 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 TIMM50Q3ZCQ8 353 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 SP8Q8IXZ3 490 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 ADGRF2Q8IZF7 708 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 CPNE1Q99829 537 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 UGT2B28Q9BY64 529 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 ZNF518BQ9C0D4 1074 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 SEMA6AQ9H2E6 1030 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 KLHL28Q9NXS3 571 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 BAZ2AQ9UIF9 1905 aaKnown RBP9.82□□□□□ -0.84
CSMD1-202ENST00000400186 MAGEB16A2A368 324 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 GAS2O43903 313 aaKnown RBP9.82□□□□□ -0.84
CSMD1-202ENST00000400186 UPP2O95045 317 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 OR1G1P47890 313 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 PYDC1Q8WXC3 89 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 PHF21BQ96EK2 531 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 ARMCX1Q9P291 453 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 MCM8Q9UJA3 840 aa9.82□□□□□ -0.84
CSMD1-202ENST00000400186 WDR27A2RRH5 827 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms