RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 MYLK2Q9H1R3 596 aa13.9□□□□□ -0.18
SIRPA-203ENST00000400068 LHX5Q9H2C1 402 aa13.9□□□□□ -0.18
SIRPA-203ENST00000400068 UBR3Q6ZT12 1888 aa13.9□□□□□ -0.18
SIRPA-203ENST00000400068 UBA6A0AVT1 1052 aaPredicted RBP13.89□□□□□ -0.19
SIRPA-203ENST00000400068 PGM1P36871 562 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 CASP2P42575 452 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 PRAMEP78395 509 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 POLNQ7Z5Q5 900 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 TTC30AQ86WT1 665 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 OR52K1Q8NGK4 314 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 KCNK16Q96T55 309 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 XAB2Q9HCS7 855 aaKnown RBP13.89□□□□□ -0.19
SIRPA-203ENST00000400068 IARS2Q9NSE4 1012 aaKnown RBP13.89□□□□□ -0.19
SIRPA-203ENST00000400068 CFAP73A6NFT4 308 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 ALOX15BO15296 676 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 ENDOD1O94919 500 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 DMPKQ09013 629 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 ITIH4Q14624 930 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 C15orf39Q6ZRI6 1047 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 ANKS1BQ7Z6G8 1248 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 GABPB2Q8TAK5 448 aaPredicted RBP13.89□□□□□ -0.19
SIRPA-203ENST00000400068 SKA2Q8WVK7 121 aaPredicted RBP13.89□□□□□ -0.19
SIRPA-203ENST00000400068 TKTL2Q9H0I9 626 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 RABL2AQ9UBK7 228 aaPredicted RBP13.89□□□□□ -0.19
SIRPA-203ENST00000400068 PGAP2Q9UHJ9 254 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 FBXO9Q9UK97 447 aaPredicted RBP13.89□□□□□ -0.19
SIRPA-203ENST00000400068 PCDHGC3Q9UN70 934 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 SMAPO00193 183 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 SOX11P35716 441 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 SERPINB4P48594 390 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 AQP5P55064 265 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 RNASEH2BQ5TBB1 312 aaKnown RBP13.89□□□□□ -0.19
SIRPA-203ENST00000400068 C12orf50Q8NA57 414 aaPredicted RBP13.89□□□□□ -0.19
SIRPA-203ENST00000400068 ZC3H15Q8WU90 426 aaKnown RBP13.89□□□□□ -0.19
SIRPA-203ENST00000400068 PTPRN2Q92932 1015 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 ADAMTS5Q9UNA0 930 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 STYXL1Q9Y6J8 313 aa13.89□□□□□ -0.19
SIRPA-203ENST00000400068 GOLGA8QA0A0J9YX86 632 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 GOLGA8OA6NCC3 632 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 PABPN1LA6NDY0 278 aaKnown RBP13.88□□□□□ -0.19
SIRPA-203ENST00000400068 GOLGA8NF8WBI6 632 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 SKAP2O75563 359 aaPredicted RBP13.88□□□□□ -0.19
SIRPA-203ENST00000400068 OR4Q2P0C623 313 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 IRF1P10914 325 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 NPR3P17342 541 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 TFE3P19532 575 aaPredicted RBP13.88□□□□□ -0.19
SIRPA-203ENST00000400068 SERPINB3P29508 390 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 ATN1P54259 1190 aaPredicted RBP13.88□□□□□ -0.19
SIRPA-203ENST00000400068 EFEMP1Q12805 493 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 ACBD5Q5T8D3 534 aaPredicted RBP13.88□□□□□ -0.19
SIRPA-203ENST00000400068 OVOS1Q6IE37 1185 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 STRA8Q7Z7C7 330 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 FUKQ8N0W3 1084 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 URGCPQ8TCY9 931 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 TMEM120AQ9BXJ8 343 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 XPNPEP3Q9NQH7 507 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 APOEP02649 317 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 ODC1P11926 461 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 ELNP15502 786 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 GRIA1P42261 906 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 MSS51Q4VC12 460 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 ANKRD20A2Q5SQ80 823 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 C10orf120Q5SQS8 335 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 ANKRD20A1Q5TYW2 823 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 PRPF39Q86UA1 669 aaKnown RBP13.88□□□□□ -0.19
SIRPA-203ENST00000400068 RHOBTB2Q9BYZ6 727 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 SPTLC1O15269 473 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 MT-CO1P00395 513 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 AKR1A1P14550 325 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 ELF1P32519 619 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 SLC17A6Q9P2U8 582 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 C2CD4BA6NLJ0 364 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 SNAI1O95863 264 aaPredicted RBP13.88□□□□□ -0.19
SIRPA-203ENST00000400068 COG7P83436 770 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 SOWAHAQ2M3V2 549 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 TMEM110Q86TL2 294 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 PCDH19Q8TAB3 1148 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 RMDN1Q96DB5 314 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 RMDN2Q96LZ7 410 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 GLT1D1Q96MS3 346 aa13.88□□□□□ -0.19
SIRPA-203ENST00000400068 GPR182O15218 404 aa13.87□□□□□ -0.19
SIRPA-203ENST00000400068 SPAG6O75602 509 aa13.87□□□□□ -0.19
SIRPA-203ENST00000400068 CDC25CP30307 473 aa13.87□□□□□ -0.19
SIRPA-203ENST00000400068 NSUN2Q08J23 767 aaKnown RBP eCLIP13.87□□□□□ -0.19
SIRPA-203ENST00000400068 SIX1Q15475 284 aaPredicted RBP13.87□□□□□ -0.19
SIRPA-203ENST00000400068 SLC45A4Q5BKX6 768 aa13.87□□□□□ -0.19
SIRPA-203ENST00000400068 SHCBP1Q8NEM2 672 aa13.87□□□□□ -0.19
SIRPA-203ENST00000400068 GSDMBQ8TAX9 411 aa13.87□□□□□ -0.19
SIRPA-203ENST00000400068 IFT43Q96FT9 208 aa13.87□□□□□ -0.19
SIRPA-203ENST00000400068 WWP1Q9H0M0 922 aa13.87□□□□□ -0.19
SIRPA-203ENST00000400068 COL2A1P02458 1487 aaPredicted RBP13.87□□□□□ -0.19
SIRPA-203ENST00000400068 LGR5O75473 907 aa13.87□□□□□ -0.19
SIRPA-203ENST00000400068 LTFP02788 710 aa13.87□□□□□ -0.19
SIRPA-203ENST00000400068 CUL3Q13618 768 aa13.87□□□□□ -0.19
SIRPA-203ENST00000400068 SPDYCQ5MJ68 293 aa13.87□□□□□ -0.19
SIRPA-203ENST00000400068 N4BP2L1Q5TBK1 243 aaPredicted RBP13.87□□□□□ -0.19
SIRPA-203ENST00000400068 NANOGNBQ7Z5D8 188 aa13.87□□□□□ -0.19
SIRPA-203ENST00000400068 POU5F2Q8N7G0 328 aa13.87□□□□□ -0.19
SIRPA-203ENST00000400068 ATXN2LQ8WWM7 1075 aaKnown RBP13.87□□□□□ -0.19
SIRPA-203ENST00000400068 NKD2Q969F2 451 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms