RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 UQCRBP14927 111 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 RPA1P27694 616 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 SLC1A6P48664 564 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 STK4Q13043 487 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 DDI2Q5TDH0 399 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 C11orf63Q6NUN7 778 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 AGMOQ6ZNB7 445 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 LPCAT1Q8NF37 534 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 SLC9A7Q96T83 725 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 NAT9Q9BTE0 207 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 UGT2B28Q9BY64 529 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 MTMR12Q9C0I1 747 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 DPP7Q9UHL4 492 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 AP4E1Q9UPM8 1137 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 ACOT9Q9Y305 439 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 DCDC2CA8MYV0 355 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 BGNP21810 368 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 PSMD4P55036 377 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 ATP1A4Q13733 1029 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 CCDC153Q494R4 210 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 RD3Q7Z3Z2 195 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 ZNF605Q86T29 641 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 SKA1Q96BD8 255 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 MCM8Q9UJA3 840 aa12.61□□□□□ -0.39
CACNA1C-219ENST00000399649 MAGEB16A2A368 324 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 PHGDHO43175 533 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 VPS4BO75351 444 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 MYL4P12829 197 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 EIF2B2P49770 351 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 KLHL12Q53G59 568 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 IZUMO2Q6UXV1 221 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 ZNF671Q8TAW3 534 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 ZNF512BQ96KM6 892 aaPredicted RBP12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 ZCCHC2Q9C0B9 1178 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 RIBC2Q9H4K1 309 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 VTI1BQ9UEU0 232 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 FBXO10Q9UK96 956 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 GTF3C4Q9UKN8 822 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 BCLAF3A2AJT9 711 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 B3GAT3O94766 335 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 OR56A5P0C7T3 313 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 PTSQ03393 145 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 MPP3Q13368 585 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 ACOX1Q15067 660 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 STARD8Q92502 1023 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 CRAMP1Q96RY5 1269 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 PDCD10Q9BUL8 212 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 RACGAP1Q9H0H5 632 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 GGA3Q9NZ52 723 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 PNMA8CA0A1B0GUJ8 204 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 CYP2A6P11509 494 aaPredicted RBP12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 WEE1P30291 646 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 HK2P52789 917 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 ILF2Q12905 390 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 COLGALT1Q8NBJ5 622 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 TMEM159Q96B96 161 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 NSMCE2Q96MF7 247 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 ISCA1Q9BUE6 129 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 PABPC3Q9H361 631 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 A1CFQ9NQ94 594 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 GPATCH2LQ9NWQ4 482 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 NCKAP1Q9Y2A7 1128 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 PCDHB12Q9Y5F1 795 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 NRKQ7Z2Y5 1582 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 MTA2O94776 668 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 CELF2O95319 508 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 HIST1H2ABP04908 130 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 KLRC1P26715 233 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 EXOSC10Q01780 885 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 KCNMA1Q12791 1236 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 MTA1Q13330 715 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 KIAA0408Q6ZU52 694 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 HIST3H2AQ7L7L0 130 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 MTDHQ86UE4 582 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 HIST1H2ACQ93077 130 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 TINF2Q9BSI4 451 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 EPB41L4BQ9H329 900 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 AKAP7Q9P0M2 348 aaPredicted RBP12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 RABGEF1Q9UJ41 708 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 ANKRD6Q9Y2G4 727 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 CRB1P82279 1406 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 FAM205CA6NFA0 338 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 MFN2O95140 757 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 NUMBP49757 651 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 GTF2A2P52657 109 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 PRR5LQ6MZQ0 368 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 FAM220AQ7Z4H9 259 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 FNDC5Q8NAU1 212 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 ACTRT2Q8TDY3 377 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 PROX1Q92786 737 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 TAAR1Q96RJ0 339 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 KCNF1Q9H3M0 494 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 ANAPC2Q9UJX6 822 aa12.6□□□□□ -0.39
CACNA1C-219ENST00000399649 CES2O00748 559 aa12.59□□□□□ -0.39
CACNA1C-219ENST00000399649 TRIM66O15016 1216 aa12.59□□□□□ -0.39
CACNA1C-219ENST00000399649 ACSL4O60488 711 aa12.59□□□□□ -0.39
CACNA1C-219ENST00000399649 ATP9AO75110 1047 aa12.59□□□□□ -0.39
CACNA1C-219ENST00000399649 MAP3K6O95382 1288 aa12.59□□□□□ -0.39
CACNA1C-219ENST00000399649 NAMPTP43490 491 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms