RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 SETDB1Q15047 1291 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 UPP1Q16831 310 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 FAM43BQ6ZT52 329 aaPredicted RBP18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 FAM131BQ86XD5 332 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 APOPT1Q96IL0 206 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 MLXIPLQ9NP71 852 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 FBXW11Q9UKB1 542 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 DCTN3O75935 186 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CABYRO75952 493 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 C1QAP02745 245 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 DHRS4L1P0CG22 281 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 MX2P20592 715 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 MAP3K7CLP57077 242 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ZNF33AQ06730 810 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 BNIP1Q12981 228 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 DPYSQ14117 519 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 SLC1A5Q15758 541 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 FAM26DQ5JW98 314 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 FYB2Q5VWT5 728 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 PM20D1Q6GTS8 502 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 LRRC8BQ6P9F7 803 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CXCL17Q6UXB2 119 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 SH2D5Q6ZV89 423 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 PCSK9Q8NBP7 692 aaKnown RBP18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 PPP1R13LQ8WUF5 828 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ZNF75CPQ92670 426 aaPredicted RBP18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 TTC17Q96AE7 1141 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 RNF19AQ9NV58 838 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 IGSF9Q9P2J2 1179 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 TTLL3Q9Y4R7 772 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 PCDHA11Q9Y5I1 949 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 SDR42E2A6NKP2 422 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 FAM159BA6NKW6 160 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ERI2A8K979 691 aaKnown RBP18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 AP3B1O00203 1094 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 EEF2KO00418 725 aaKnown RBP18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 INPPL1O15357 1258 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 LPXNO60711 386 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 METTL18O95568 372 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 LTFP02788 710 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 HTR7P34969 479 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CLCNKBP51801 687 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ATXN1P54253 815 aaKnown RBP18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 GRIK3Q13003 919 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 OTUD1Q5VV17 481 aaPredicted RBP18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 STEAP4Q687X5 459 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 FAM171BQ6P995 826 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 AGMOQ6ZNB7 445 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 TIFABQ6ZNK6 161 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 RFX8Q6ZV50 586 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 SUGP1Q8IWZ8 645 aaKnown RBP18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 TAB3Q8N5C8 712 aaPredicted RBP18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 TCP10LQ8TDR4 215 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 PCED1BQ96HM7 432 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 HHIPL1Q96JK4 782 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 VAT1Q99536 393 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 SMOQ99835 787 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ULBP1Q9BZM6 244 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 KIF9Q9HAQ2 790 aa18.28■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CEP350Q5VT06 3117 aa18.27■□□□□ 0.52
HLA-DQB1-204ENST00000399084 MYADML2A6NDP7 307 aa18.27■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CLDN5O00501 218 aa18.27■□□□□ 0.52
HLA-DQB1-204ENST00000399084 KLF11O14901 512 aa18.27■□□□□ 0.52
HLA-DQB1-204ENST00000399084 BEST1O76090 585 aa18.27■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ALDH1A2O94788 518 aa18.27■□□□□ 0.52
HLA-DQB1-204ENST00000399084 TGDSO95455 350 aa18.27■□□□□ 0.52
HLA-DQB1-204ENST00000399084 TROVE2P10155 538 aaKnown RBP eCLIP18.27■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ACAT1P24752 427 aaKnown RBP18.27■□□□□ 0.52
HLA-DQB1-204ENST00000399084 NRLP54845 237 aa18.27■□□□□ 0.52
HLA-DQB1-204ENST00000399084 SEMA3BQ13214 749 aa18.27■□□□□ 0.52
HLA-DQB1-204ENST00000399084 DSC3Q14574 896 aa18.27■□□□□ 0.52
HLA-DQB1-204ENST00000399084 EFTUD2Q15029 972 aaKnown RBP eCLIP18.27■□□□□ 0.52
HLA-DQB1-204ENST00000399084 DBN1Q16643 649 aa18.27■□□□□ 0.52
HLA-DQB1-204ENST00000399084 SLC40A1Q9NP59 571 aa18.27■□□□□ 0.52
HLA-DQB1-204ENST00000399084 M0QZQ0 153 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 DCLK1O15075 740 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 ADAMTS4O75173 837 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 AVILO75366 819 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 HNRNPH1P31943 449 aaKnown RBP18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 SERPINB6P35237 376 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 NEK3P51956 506 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 FAAP100Q0VG06 881 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 STXBP5Q5T5C0 1151 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 KIAA0319Q5VV43 1072 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 THEM5Q8N1Q8 247 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 CCDC63Q8NA47 563 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 COLGALT1Q8NBJ5 622 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 KLHDC9Q8NEP7 349 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 CDKL2Q92772 493 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 MRRFQ96E11 262 aaKnown RBP18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 CFAP36Q96G28 342 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 KLC4Q9NSK0 619 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 MOCS1Q9NZB8 636 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 TRHDEQ9UKU6 1024 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 PADI3Q9ULW8 664 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 TLL2Q9Y6L7 1015 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 MYBPHLA2RUH7 354 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 FAM155AB1AL88 458 aaPredicted RBP18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 FYNP06241 537 aa18.26■□□□□ 0.51
HLA-DQB1-204ENST00000399084 TYMPP19971 482 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms