RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 RPS6KL1Q9Y6S9 549 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 EME2A4GXA9 379 aaPredicted RBP9.58□□□□□ -0.88
ATL3-201ENST00000398868 PDXKO00764 312 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 PRKAG1P54619 331 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 KCNK10P57789 538 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 ERVK-9P63128 1117 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 ERVK-24P63145 666 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 TP53BP2Q13625 1128 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 CCNIQ14094 377 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 CSHL1Q14406 222 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 CBWD3Q5JTY5 395 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 MIIPQ5JXC2 388 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 CBWD5Q5RIA9 395 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 TRAPPC5Q8IUR0 188 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 RTL3Q8N8U3 475 aaKnown RBP9.58□□□□□ -0.88
ATL3-201ENST00000398868 AGBL3Q8NEM8 1001 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 TRPC4APQ8TEL6 797 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 TPD52L3Q96J77 140 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 PDLIM2Q96JY6 352 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 TBATAQ96M53 351 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 IRF6O14896 467 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 CYP2F1P24903 491 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 PSMA4P25789 261 aaKnown RBP9.58□□□□□ -0.88
ATL3-201ENST00000398868 PDIA6Q15084 440 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 HIST2H2ACQ16777 129 aaPredicted RBP9.58□□□□□ -0.88
ATL3-201ENST00000398868 EFHC1Q5JVL4 640 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 HIST2H2AA3Q6FI13 130 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 NT5DC4Q86YG4 428 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 DENND1CQ8IV53 801 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 DEFB119Q8N690 84 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 FAM84AQ96KN4 292 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 NR5A2O00482 541 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 PSTPIP1O43586 416 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 ZNF682O95780 498 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 PIRTP0C851 137 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 SRGNP10124 158 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 MSH3P20585 1137 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 NUP62P37198 522 aaPredicted RBP9.58□□□□□ -0.88
ATL3-201ENST00000398868 LRRN4CLQ8ND94 238 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 BTBD9Q96Q07 612 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 AGPAT3Q9NRZ7 376 aa9.58□□□□□ -0.88
ATL3-201ENST00000398868 SPHKAPQ2M3C7 1700 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 CLDN5O00501 218 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 FFAR2O15552 330 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 CLASP2O75122 1294 aaKnown RBP9.57□□□□□ -0.88
ATL3-201ENST00000398868 IL1BP01584 269 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 RPS12P25398 132 aaKnown RBP9.57□□□□□ -0.88
ATL3-201ENST00000398868 ABATP80404 500 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 DPYDQ12882 1025 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 POMZP3Q6PJE2 187 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 MPZL3Q6UWV2 235 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 DNAJC14Q6Y2X3 702 aaPredicted RBP9.57□□□□□ -0.88
ATL3-201ENST00000398868 JAMLQ86YT9 394 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.57□□□□□ -0.88
ATL3-201ENST00000398868 PSD3Q9NYI0 1048 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 RAB23Q9ULC3 237 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 WBP11Q9Y2W2 641 aaKnown RBP9.57□□□□□ -0.88
ATL3-201ENST00000398868 ARHGAP31Q2M1Z3 1444 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 CHURC1-FNTBB4DL54 471 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 LCA5LO95447 670 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 ACRP10323 421 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 SCNN1GP51170 649 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 NDST1P52848 882 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 POU5F1Q01860 360 aaKnown RBP9.57□□□□□ -0.88
ATL3-201ENST00000398868 IRAK1BP1Q5VVH5 260 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 BTN2A1Q7KYR7 527 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 CD99L2Q8TCZ2 262 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 EMILIN2Q9BXX0 1053 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 AGO4Q9HCK5 861 aaKnown RBP9.57□□□□□ -0.88
ATL3-201ENST00000398868 BTBD7Q9P203 1132 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 RPS6KB2Q9UBS0 482 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 CLASP1Q7Z460 1538 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 SERPINB8P50452 374 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 PDK1Q15118 436 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 NRF1Q16656 503 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 CYP51A1Q16850 503 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 TMED8Q6PL24 325 aaPredicted RBP9.57□□□□□ -0.88
ATL3-201ENST00000398868 ZNF438Q7Z4V0 828 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 CENPLQ8N0S6 344 aaPredicted RBP9.57□□□□□ -0.88
ATL3-201ENST00000398868 ARNTL2Q8WYA1 636 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 FEM1CQ96JP0 617 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 FAR2Q96K12 515 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 VIPAS39Q9H9C1 493 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 THG1LQ9NWX6 298 aaKnown RBP9.57□□□□□ -0.88
ATL3-201ENST00000398868 ZNF624Q9P2J8 865 aaPredicted RBP9.57□□□□□ -0.88
ATL3-201ENST00000398868 CDH16O75309 829 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 CRADDP78560 199 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 NEK10Q6ZWH5 1172 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 ZNF579Q8NAF0 562 aaKnown RBP9.57□□□□□ -0.88
ATL3-201ENST00000398868 VTA1Q9NP79 307 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 DDX4Q9NQI0 724 aaKnown RBP9.57□□□□□ -0.88
ATL3-201ENST00000398868 LSM3P62310 102 aaKnown RBP9.57□□□□□ -0.88
ATL3-201ENST00000398868 SFSWAPQ12872 951 aaKnown RBP9.57□□□□□ -0.88
ATL3-201ENST00000398868 CES5AQ6NT32 575 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 TAF8Q7Z7C8 310 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 DNAJC5Q9H3Z4 198 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 SPG21Q9NZD8 308 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 UBQLN1Q9UMX0 589 aaKnown RBP9.57□□□□□ -0.88
ATL3-201ENST00000398868 LRRC7Q96NW7 1537 aa9.57□□□□□ -0.88
ATL3-201ENST00000398868 PDS5AQ29RF7 1337 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms