RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 SERPINA6P08185 405 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 SRGAP2CP0DJJ0 459 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 SRGAP2BP0DMP2 458 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 ADARP55265 1226 aaKnown RBP10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 TRIM32Q13049 653 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 DENND1BQ6P3S1 775 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 DRICH1Q6PGQ1 229 aaPredicted RBP10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 TMC7Q7Z402 723 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 ARFGAP1Q8N6T3 406 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 ZFP28Q8NHY6 868 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 GSDMBQ8TAX9 411 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 MIPOL1Q8TD10 442 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 EMID1Q96A84 441 aaPredicted RBP10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 MTMR12Q9C0I1 747 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 ZNF358Q9NW07 568 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 NOD1Q9Y239 953 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 RFPL1O75677 317 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 TFAP2AP05549 437 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 CALB1P05937 261 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 DESP17661 470 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 MAGEA10P43363 369 aaPredicted RBP10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 CDH8P55286 799 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 PRKG1Q13976 671 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 PIGHQ14442 188 aaPredicted RBP10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 PSMD6Q15008 389 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 NRF1Q16656 503 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 PPM1JQ5JR12 505 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 N4BP2L1Q5TBK1 243 aaPredicted RBP10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 RC3H1Q5TC82 1133 aaKnown RBP10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 CES3Q6UWW8 571 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 TRIM72Q6ZMU5 477 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 TRIM67Q6ZTA4 783 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 AMIGO2Q86SJ2 522 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 METTL25Q8N6Q8 603 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 LRGUKQ96M69 825 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 RMDN3Q96TC7 470 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 TMCO1Q9UM00 188 aa10.2□□□□□ -0.78
PTCHD4-202ENST00000398738 TMEM229AB2RXF0 380 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 VILLO15195 856 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 TMCC1O94876 653 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 BPGMP07738 259 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 RBL1P28749 1068 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 MIPP30301 263 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 FDFT1P37268 417 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 TNFSF9P41273 254 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 SLC1A6P48664 564 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 CCDC142Q17RM4 750 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 MYLK3Q32MK0 819 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 PDPK2PQ6A1A2 396 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 B3GNT6Q6ZMB0 384 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 SH2D5Q6ZV89 423 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 TAS1R3Q7RTX0 852 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 FAM156AQ8NDB6 213 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 ZSCAN18Q8TBC5 510 aaPredicted RBP10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 ERLEC1Q96DZ1 483 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 DCUN1D1Q96GG9 259 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 MASTLQ96GX5 879 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 ZDHHC15Q96MV8 337 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 C7orf26Q96N11 449 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 KCTD15Q96SI1 283 aaPredicted RBP10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 CISHQ9NSE2 258 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 TBC1D22BQ9NU19 505 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 DDX56Q9NY93 547 aaKnown RBP10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 TEX264Q9Y6I9 313 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 KIF13BQ9NQT8 1826 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 SDR42E2A6NKP2 422 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 K7ERI5 159 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 EXTL3O43909 919 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 KRT38O76015 456 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 NUDT2P50583 147 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 RPS6P62753 249 aaKnown RBP10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 YWHAZP63104 245 aaKnown RBP10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 ITGA9Q13797 1035 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 C15orf59Q2T9L4 293 aaPredicted RBP10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 PTPN20Q4JDL3 420 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 TRIM42Q8IWZ5 723 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 WDTC1Q8N5D0 677 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 PIWIL2Q8TC59 973 aaKnown RBP10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 ZNF778Q96MU6 729 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 OXCT2Q9BYC2 517 aaPredicted RBP10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 HAPLN2Q9GZV7 340 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 USP29Q9HBJ7 922 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 GPAMQ9HCL2 828 aa10.19□□□□□ -0.78
PTCHD4-202ENST00000398738 A0A0J9YVX5 310 aa10.18□□□□□ -0.78
PTCHD4-202ENST00000398738 PMM2O15305 246 aa10.18□□□□□ -0.78
PTCHD4-202ENST00000398738 ZSCAN9O15535 394 aaPredicted RBP10.18□□□□□ -0.78
PTCHD4-202ENST00000398738 ITGBL1O95965 494 aaPredicted RBP10.18□□□□□ -0.78
PTCHD4-202ENST00000398738 SAT1P21673 171 aa10.18□□□□□ -0.78
PTCHD4-202ENST00000398738 RPL5P46777 297 aaKnown RBP10.18□□□□□ -0.78
PTCHD4-202ENST00000398738 SESN2P58004 480 aaPredicted RBP10.18□□□□□ -0.78
PTCHD4-202ENST00000398738 HPCAP84074 193 aa10.18□□□□□ -0.78
PTCHD4-202ENST00000398738 TRPC3Q13507 836 aa10.18□□□□□ -0.78
PTCHD4-202ENST00000398738 PPP2R5DQ14738 602 aa10.18□□□□□ -0.78
PTCHD4-202ENST00000398738 UGT2A3Q6UWM9 527 aa10.18□□□□□ -0.78
PTCHD4-202ENST00000398738 TSHZ1Q6ZSZ6 1077 aa10.18□□□□□ -0.78
PTCHD4-202ENST00000398738 BBS12Q6ZW61 710 aa10.18□□□□□ -0.78
PTCHD4-202ENST00000398738 ADGRF2Q8IZF7 708 aa10.18□□□□□ -0.78
PTCHD4-202ENST00000398738 PPP4R1Q8TF05 950 aa10.18□□□□□ -0.78
PTCHD4-202ENST00000398738 NCSTNQ92542 709 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms