RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 ZNF333Q96JL9 665 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 NECTIN4Q96NY8 510 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ADI1Q9BV57 179 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 EPB41L4AQ9HCS5 686 aaPredicted RBP2.8□□□□□ -1.96
CHD9-202ENST00000398510 HMGXB4Q9UGU5 601 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 VPS28Q9UK41 221 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 DERAQ9Y315 318 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ASB3Q9Y575 518 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 KMT2EQ8IZD2 1858 aa2.8□□□□□ -1.96
CHD9-202ENST00000398510 ASXL3Q9C0F0 2248 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 GMNCA6NCL1 334 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 SOCS7O14512 581 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 HIST1H2ABP04908 130 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 LAG3P18627 525 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 SUOXP51687 545 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 PTPN11Q06124 597 aaPredicted RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 SHROOM1Q2M3G4 852 aaPredicted RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 C16orf87Q6PH81 154 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 HIST3H2AQ7L7L0 130 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 TICAM1Q8IUC6 712 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 MPP5Q8N3R9 675 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 HJURPQ8NCD3 748 aaPredicted RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 MCUQ8NE86 351 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 ZNF564Q8TBZ8 553 aaPredicted RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 HIST1H2ACQ93077 130 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 ELOVL2Q9NXB9 296 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 TRHDEQ9UKU6 1024 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 RUVBL2Q9Y230 463 aaKnown RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 ADGRG1Q9Y653 693 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 C9J4A7 227 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 ACSL4O60488 711 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 PLA2G6O60733 806 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 SIN3BO75182 1162 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 CLTBP09497 229 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 RLBP1P12271 317 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 TTKP33981 857 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 PRIM2P49643 509 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 ATP1A2P50993 1020 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 GRSF1Q12849 480 aaKnown RBP eCLIP2.79□□□□□ -1.96
CHD9-202ENST00000398510 STK4Q13043 487 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 BIKQ13323 160 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 HIC1Q14526 733 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 SNRNP35Q16560 246 aaKnown RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 TXNRD3Q86VQ6 643 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 TREML1Q86YW5 311 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 ADGRF4Q8IZF3 695 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 NATD1Q8N6N6 113 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 BHLHE22Q8NFJ8 381 aaPredicted RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 RNF217Q8TC41 542 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 DACH2Q96NX9 599 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 ZNF717Q9BY31 904 aaPredicted RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 LRMDAQ9H2I8 198 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 ATP13A3Q9H7F0 1226 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 DCP1AQ9NPI6 582 aaPredicted RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 ABCC13Q9NSE7 274 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 IMPAD1Q9NX62 359 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 UBAP1Q9NZ09 502 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 RSPH14Q9UHP6 348 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 SATB2Q9UPW6 733 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 CKAP5Q14008 2032 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 BLACEA4D250 179 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 YKT6O15498 198 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 DDX3YO15523 660 aaKnown RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 SLC25A12O75746 678 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 KCNH1O95259 989 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 GH2P01242 217 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 ASLP04424 464 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 NTSP30990 170 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 SELENOVP59797 346 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 TMPRSS15P98073 1019 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 LAPTM5Q13571 262 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 DMC1Q14565 340 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 SLC15A2Q16348 729 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 INAQ16352 499 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 TCP11X2Q5H9J9 407 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 ZNF697Q5TEC3 545 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 KRT77Q7Z794 578 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 DNAJC10Q8IXB1 793 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 ZHX1-C8orf76Q96EF9 292 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 KIF12Q96FN5 646 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 BORCS6Q96GS4 357 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 ELMO2Q96JJ3 720 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 TAF1DQ9H5J8 278 aaPredicted RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 GDPD2Q9HCC8 539 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 ADGRE2Q9UHX3 823 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 TMCC3Q9ULS5 477 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 NENFQ9UMX5 172 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 ZNF232Q9UNY5 417 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 RP1L1Q8IWN7 2480 aaPredicted RBP2.79□□□□□ -1.96
CHD9-202ENST00000398510 C10orf71Q711Q0 1435 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 NEMP2A6NFY4 417 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 MOXD2PA6NHM9 499 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 TRIM13O60858 407 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 WDR47O94967 919 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 KLHL2O95198 593 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 FTH1P02794 183 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 IL6P05231 212 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 PLCG1P19174 1290 aa2.79□□□□□ -1.96
CHD9-202ENST00000398510 PPIBP23284 216 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms